Return to main results Retrieve Phyre Job Id

Job DescriptionP00350
Confidence95.42%DateThu Jan 5 10:56:33 GMT 2012
Rank445Aligned Residues94
% Identity20%Templatec2pwzG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10. ........20..... ....30.........40.. .......50.........60.........70......
Predicted Secondary structure 


.

...



...

















Query SS confidence 







.













. . .
















. . .

































Query Sequence  QQIGVVGM. AVMGRNLALNIESR. . . GYTVSIFNRSREKTEEV. . . IAENPGKKLVPYYTVKEFVESLETPRRILLMVKA
Query Conservation 
 





.
 

  

 

   ...
  
 



       
...   

      
 
  
 
  
    



 

 
Alig confidence 







.













...









.





...

































Template Conservation 


 


  
 

   
  
        

 
 
  .        

                    
  








 
Template Sequence  MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA. PVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV
Template Known Secondary structure 
TTTSS
TT
SS.TTTS
SS
SS

TT
S



Template Predicted Secondary structure 











.
















Template SS confidence 















































































   1........10.........20.........30...... ...40.........50.........60.........70.........
 
   77 ..80.........90........
Predicted Secondary structure  ...............





Query SS confidence 
. . . . . . . . . . . . . . .




















Query Sequence  G. . . . . . . . . . . . . . . AGTDAAIDSLKPYLDKGDIII
Query Conservation   ...............  
  

  
   
  
 


Alig confidence 
...............




















Template Conservation         
   
  
  
   
   
    
  
 

Template Sequence  ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGI
Template Known Secondary structure 


SS


TTS
Template Predicted Secondary structure 









Template SS confidence 




































   80.........90.........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions