Job Description P00350 Confidence 99.93% Date Thu Jan 5 10:56:33 GMT 2012 Rank 34 Aligned Residues 207 % Identity 15% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	.	.	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T
Query Conservation																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																																	.
Template Sequence		S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I	A	E	A	D	.
Template Known Secondary structure		S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S										S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.															.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Query Sequence		P	R	R	I	L	L	M	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	.	.	.	F	N	F	I	G	T	G	V	S	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Alig confidence		.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F	Q	V	L	S	N	P	E	F	L
Template Known Secondary structure		.	.										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure												.	.	.	.								.	.	.	.	.
Query SS confidence												.	.	.	.								.	.	.	.	.
Query Sequence		G	E	E	G	A	L	K	G	P	S	.	.	.	.	I	M	P	G	G	Q	K	.	.	.	.	.	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A
Query Conservation												.	.	.	.								.	.	.	.	.
Alig confidence												.	.	.	.								.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.
Template Sequence		A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	.	.	.	.	.	.	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R	I	S	S	I	N	S	I
Template Known Secondary structure			T	T								S		S								S	S																T	T	S		G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		S	A	V	C	.	E	A	T	G	A	E	I	S	E	V	A	H	A	V	G
Template Known Secondary structure						.				T
Template Predicted Secondary structure						.
Template SS confidence
		245	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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