Job Description P00350 Confidence 98.41% Date Thu Jan 5 10:56:33 GMT 2012 Rank 191 Aligned Residues 121 % Identity 13% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.			.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																.	.	.	.										.	.							.
Query SS confidence																.	.	.	.										.	.							.
Query Sequence		S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	.	.	.	.	R	N	L	A	L	N	I	E	S	.	.	R	G	Y	T	V	S	.	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V
Query Conservation																.	.	.	.										.	.							.
Alig confidence																.	.	.	.										.	.							.																																				.
Template Conservation																																																																									.
Template Sequence		R	P	I	R	V	G	F	V	G	L	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	D	S	L	E	S	F	A	Q	Y	K	D	.	I	D	M	I	V	V	S	V
Template Known Secondary structure		S								S			S	T	T	S					T								T	T	T	T									S	S											T	T		T	T					S									T	T	.		S						S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																		.	.	.												.
Query SS confidence																		.	.	.												.
Query Sequence		K	A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	.	.	.	L	D	K	G	D	I	I	I	D	G	G	.	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I
Query Conservation																		.	.	.												.
Alig confidence																		.	.	.												.
Template Conservation
Template Sequence		K	V	P	E	H	Y	E	V	V	K	N	I	L	E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A	N	L	Q	T
Template Known Secondary structure																T	T	T	T		S	S								S	S	S	S	S	S													T		T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions