Return to main results Retrieve Phyre Job Id

Job DescriptionP00350
Confidence100.00%DateThu Jan 5 10:56:33 GMT 2012
Rank3Aligned Residues466
% Identity68%Templatec2iz1C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating; PDBTitle: 6pdh complexed with pex inhibitor synchrotron data
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTD
Query Conservation   

 






 

  

 

   
  
 



       
   

      
 
  
 
  
    



 

    
 
Alig confidence 















































































Template Conservation   
  

 



 

  

 

   
  
 



       
           
 
  
 
  
  





 

    
 
Template Sequence  AQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD
Template Known Secondary structure 

BS

STT


SSTTTS

SSTB
SS



TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  AAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAA
Query Conservation   

  
   
  
 



 

     
   
  
   

 








  

  








 

 
 
 


  


Alig confidence 















































































Template Conservation   

  
   
  
 



 

     
   
  
   

 








  

  








 

   
 


  


Template Sequence  ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQIAA
Template Known Secondary structure  GGG

TT

S


TTT

S


S
S
Template Predicted Secondary structure 
























Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162. ......170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 

.
















Query SS confidence 

.












































































Query Sequence  VA. EDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFT
Query Conservation    .  
   
   
  



 





 


  

 



  

    

    

 

  

 
 
 


 


   
 
Alig confidence 

.












































































Template Conservation 
        
   
  



 





 



 

 



  

    
     

 

  

 
 
 
 
  

  

 
Template Sequence  KAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLK
Template Known Secondary structure  B
TTT

BSB


BSTTTS


TTTTT
BT
Template Predicted Secondary structure 



















Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   241... .....250.........260.........270.........280.........290.........300.........310.........
Predicted Secondary structure 


.





























Query SS confidence 



.










































































Query Sequence  KKDE. DGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIE
Query Conservation    
 .        
 
    



 

   
  



 
 
  
   
  
  
  
                       
Alig confidence 



.










































































Template Conservation    
        
 
 
     


 

   
  



 
 
  
   
  
  
  
  
                    
Template Sequence  RKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLSGPALDFSGDKKEVIE
Template Known Secondary structure 
B
TTSSSBGGGTS
S




S
TTT


T








S
Template Predicted Secondary structure 

































Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   320.........330.........340.........350.........360.........370.........380.........390.........
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  KVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADD
Query Conservation   
  

    
 





 

  

    
 
    

 


 





 

  
  

   
 
 

     
      
Alig confidence 















































































Template Conservation   
  

    
 





 

  

    
 
    

 


 





  
  
  
      
 

     
      
Template Sequence  KIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKR
Template Known Secondary structure  T



TSSSSTT
BTT
TT
S
GGGS
Template Predicted Secondary structure 




















Template SS confidence 















































































   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   400.........410.........420.........430.........440.........450.........460.......
Predicted Secondary structure 

























Query SS confidence 



































































Query Sequence  YQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWL
Query Conservation       
  
  
   


 
  
 

 
            






 




  
 
  
 

  
 
Alig confidence 



































































Template Conservation       
  
  
   


 
  
 

 
            






 




  
 
  
  
  
 
Template Sequence  YQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWY
Template Known Secondary structure  T


T
SS
T


B

SSS
S
B




Template Predicted Secondary structure 

























Template SS confidence 



































































   402.......410.........420.........430.........440.........450.........460.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions