Job Description P00350 Confidence 99.76% Date Thu Jan 5 10:56:33 GMT 2012 Rank 61 Aligned Residues 175 % Identity 14% Template c2i76B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein tm1727 from thermotoga maritima Resolution 3.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A	I	D
Query Conservation
Alig confidence																							.	.	.	.																						.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																							.	.	.	.																						.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		L	N	F	V	G	T	G	T	L	T	R	F	F	L	E	C	L	K	I	G	Y	.	.	.	.	I	L	S	R	S	I	D	R	A	R	N	L	A	E	V	Y	G	G	K	A	A	.	.	.	.	.	.	.	.	.	.	T	L	E	K	H	P	E	V	V	F	V	I	V	P	D	R	.	Y	I	K	T	V	A	N
Template Known Secondary structure								S	T	T													.	.	.	.	B			S	S									T	T	T	T					.	.	.	.	.	.	.	.	.	.	T	T											S				.							T
Template Predicted Secondary structure																							.	.	.	.																						.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D
Query Conservation
Alig confidence					.	.	.																						.	.	.	.																																															.	.	.
Template Conservation					.	.	.																						.	.	.	.																																															.	.	.
Template Sequence		H	L	N	.	.	.	L	G	D	A	V	L	V	H	C	S	G	F	L	S	S	E	I	F	K	K	S	.	.	.	.	G	R	A	S	I	H	P	N	F	S	F	L	E	K	A	L	E	X	K	D	Q	I	V	F	G	L	E	G	D	E	R	G	L	P	I	V	K	K	I	A	E	E	I	S	G	K	.	.	.
Template Known Secondary structure		T	T		.	.	.		S	S								S	S	S		S	T	T	T		S	S	.	.	.	.	S								S				T	T	G	G	G		G	G	G									T	T													S	S		.	.	.
Template Predicted Secondary structure					.	.	.																						.	.	.	.																																															.	.	.
Template SS confidence
		75	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	.	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E
Query Conservation																			.
Alig confidence		.	.	.	.														.										.	.	.	.												.
Template Conservation		.	.	.	.																								.	.	.	.												.
Template Sequence		.	.	.	.	Y	F	V	I	E	K	K	K	A	Y	H	L	A	A	V	I	A	S	N	F	P	V	A	.	.	.	.	L	A	Y	L	S	K	R	I	Y	T	L	.	L	G	L	D	E	P	E
Template Known Secondary structure		.	.	.	.																			T					.	.	.	.												.	T	T		S
Template Predicted Secondary structure		.	.	.	.																								.	.	.	.												.
Template SS confidence
						147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions