Job Description P00350 Confidence 97.40% Date Thu Jan 5 10:56:33 GMT 2012 Rank 293 Aligned Residues 125 % Identity 11% Template c2fnzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of the lactate dehydrogenase from cryptosporidium2 parvum complexed with cofactor (b-nicotinamide adenine dinucleotide)3 and inhibitor (oxamic acid) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																													.															.	.	.	.																																		.
Query SS confidence																													.															.	.	.	.																																		.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	.	T	V	S	I	F	N	R	S	R	E	K	T	E	E	.	.	.	.	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	.
Query Conservation																													.															.	.	.	.																																		.
Alig confidence																													.															.	.	.	.																																		.
Template Conservation
Template Sequence		I	E	R	R	K	I	A	V	I	G	S	G	Q	I	G	G	N	I	A	Y	I	V	G	K	D	N	L	A	D	V	V	L	F	D	I	A	E	G	I	P	Q	G	K	A	L	D	I	T	H	S	M	V	M	F	G	S	T	S	K	V	I	G	T	N	D	Y	A	D	I	S	G	S	D	V	V	I	I	T	A	S
Template Known Secondary structure													S														T		S							S	S	S	S																	T											G	G	G	G	T	T		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																	.
Template Sequence		I	P	G	R	P	K	D	D	R	S	E	L	L	F	G	N	A	R	I	L	D	S	V	A	E	G	V	K	K	Y	C	.	P	N	A	F	V	I	C	I	T	N	P	L	D	V	M	V	S	H	F	Q	K	V	S	G	L	P	H	N	K	V	C	G	M	A
Template Known Secondary structure			S	S			S	S		G	G	G	G																				.	T	T	S							S	S																G	G	G
Template Predicted Secondary structure																																	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions