Job Description P00350 Confidence 96.99% Date Thu Jan 5 10:56:33 GMT 2012 Rank 331 Aligned Residues 83 % Identity 22% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.										.
Query SS confidence																							.										.
Query Sequence		S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	.	E	S	R	G	Y	T	V	S	I	.	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G
Query Conservation																							.										.
Alig confidence																							.										.										.	.	.																				.	.												.
Template Conservation																																											.	.	.																				.	.												.
Template Sequence		R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	.	.	.	R	P	V	R	G	G	V	I	E	H	V	D	L	L	P	Q	R	V	P	.	.	G	R	I	E	I	A	L	L	T	V	P	.	R	E	A
Template Known Secondary structure		S										S										S				S	S									S		T	T	T	T	T	.	.	.				T	T						G	G	G					S	T	.	.	T	T								S		.
Template Predicted Secondary structure																																											.	.	.																				.	.												.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.		150	.	.
		80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	A	I	D	S	L	K	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	K	A	A	D	L	L	V	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions