Job Description P00350 Confidence 100.00% Date Thu Jan 5 10:56:33 GMT 2012 Rank 8 Aligned Residues 255 % Identity 21% Template c2cvzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: structure of hydroxyisobutyrate dehydrogenase from thermus2 thermophilus hb8 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A
Query Conservation
Alig confidence																										.																					.	.	.	.	.													.	.	.
Template Conservation																										.																					.	.	.	.	.													.	.	.
Template Sequence		E	K	V	A	F	I	G	L	G	A	X	G	Y	P	X	A	G	H	L	A	R	R	F	P	.	T	L	V	W	N	R	T	F	E	K	A	L	R	H	Q	E	E	F	G	S	.	.	.	.	.	E	A	V	P	L	E	R	V	A	E	A	R	.	.	.	V	I	F	T	C	L	P	T	T	R	E	V	Y	E	V
Template Known Secondary structure										S	T	T												S		.						S	S														.	.	.	.	.					G	G	G	G	G	G	S	S	.	.	.							S	S
Template Predicted Secondary structure																										.																					.	.	.	.	.													.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V
Query Conservation																																																								.
Alig confidence																																																								.																				.
Template Conservation																																																																												.
Template Sequence		A	E	A	L	Y	P	Y	L	R	E	G	T	Y	W	V	D	A	T	S	G	E	P	E	A	S	R	R	L	A	E	R	L	R	E	K	G	V	T	Y	L	D	A	P	V	S	G	G	T	S	G	A	E	A	G	T	L	T	V	X	L	G	G	P	E	E	A	V	E	R	V	R	P	F	L	.	A	Y	A	K	K
Template Known Secondary structure						T	T	T			T	T							S																T	T	T										S								T								S									G	G	G		.	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I	F	T	K	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																				.														.	.	.
Template Conservation		.	.	.	.	.	.	.																																				.														.	.	.
Template Sequence		.	.	.	.	.	.	.	V	V	H	V	G	P	V	G	A	G	H	A	V	K	A	I	N	N	A	L	L	A	V	N	L	W	A	A	G	E	G	L	L	A	L	.	V	K	Q	G	V	S	A	E	K	A	L	E	V	.	.	.	I	N	A	S	S	G	R	S	N	A	T	E	N	L	I	P	Q	R	V	L	T
Template Known Secondary structure		.	.	.	.	.	.	.						S	T	T																												.			T	T										.	.	.		T	T	S	T	T								T					T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																				.														.	.	.
Template SS confidence
									152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		243	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		D	E	.	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E	S	V	F
Query Conservation				.
Alig confidence				.														.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		R	A	F	P	K	T	F	A	L	G	L	L	V	K	D	L	.	.	.	.	.	.	G	I	A	X	G	V	L	D	G	E	K	A	P	S	P	L	L	R	L	A	R	E
Template Known Secondary structure		S					S	S	B									.	.	.	.	.	.								T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions