Return to main results Retrieve Phyre Job Id

Job DescriptionP00350
Confidence96.73%DateThu Jan 5 10:56:33 GMT 2012
Rank357Aligned Residues122
% Identity13%Templatec1y8qA_
PDB info PDB header:ligaseChain: A: PDB Molecule:ubiquitin-like 1 activating enzyme e1a; PDBTitle: sumo e1 activating enzyme sae1-sae2-mg-atp complex
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20....... ..30.........40...... ...50.........60.........70.....
Predicted Secondary structure 









.



....














Query SS confidence 


























.


















. . . .




























Query Sequence  MSKQQIGVVGMAVMGRNLALNIESRGY. TVSIFNRSREKTEEVIAEN. . . . PGKKLVPYYTVKEFVESLETPRRILLMVK
Query Conservation 
 

 






 

  

 

   
 . 
 



       
   
....
      
 
  
 
  
    



 

Alig confidence 


























.


















....


















.








Template Conservation 
  
 


 
  


 

 


 
 

  
 
 
   
   

   
     


  
       
  

.
   
    
Template Sequence  LRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN. PMVDVKVDT
Template Known Secondary structure  T


ST
S


B

SS
GGG
TTS
SS
TTSBT
.TTS
Template Predicted Secondary structure 



















.

Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100... ......110..
 
   76...80.........90.........100.........110.........120.........
Predicted Secondary structure 



















Query SS confidence 





















































Query Sequence  AGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSG
Query Conservation      
  

  
   
  
 



 

     
   
  
   

 







Alig confidence 

.....

















.



























Template Conservation    .....            



  .         

   
   
  
     
Template Sequence  ED. . . . . IEKKPESFFTQFDAVCLT. CCSRDVIVKVDQICHKNSIKFFTGDVFG
Template Known Secondary structure  S
.....GGG

TT
S.S

TT
B
Template Predicted Secondary structure 

.....









.









Template SS confidence 





















































   113. .....120.........130.. .......140.........150.........160
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions