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Job DescriptionP00350
Confidence100.00%DateThu Jan 5 10:56:33 GMT 2012
Rank10Aligned Residues259
% Identity20%Templatec1vpdA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:tartronate semialdehyde reductase; PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2]
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  QQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAA
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Template Sequence  XKVGFIGLGIXGKPXSKNLLKAGYSLVVSDRNPEAIADVIAAGA. . . . ETASTAKAIAEQCD. . . VIITXLPNSPHVKEV
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   3......10.........20.........30.........40...... ...50.........60 .........70.....
 
   84 .....90.........100.........110.........120.........130....... ..140.........150.........
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Query Sequence  I. . . DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKG. PSIMPGGQKEAYELVAPILTKI
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Template Sequence  ALGENGIIEGAKPGTVLIDXSSIAPLASREISDALKAKGVEXLDAPVSGGEPKAIDGTLSVXVGGDKAIFDKYYDLXKAX
Template Known Secondary structure  STT


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   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  AAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIF
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Template Sequence  AGS. . . . . . . VVHTGDIGAGNVTKLANQVIVALNIAAXSEALTLA. TKAGVNPDLVYQA. . . IRGGLAGSTVLDAKAPXV
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   156.. .160.........170.........180.........190... ......200...... ...210.........220....
 
   240.........250.........260.........270.........280......
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Query Sequence  TKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFA
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Template Sequence  XDRNFKPGFRIDLHIKDL. . . . . . ANALDTSHGVGAQLPLTAAVXEX
Template Known Secondary structure  TT



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   225....230.........240.. .......250.........260.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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