Job Description P00350 Confidence 100.00% Date Thu Jan 5 10:56:33 GMT 2012 Rank 10 Aligned Residues 259 % Identity 20% Template c1vpdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:tartronate semialdehyde reductase; PDBTitle: x-ray crystal structure of tartronate semialdehyde reductase2 [salmonella typhimurium lt2] Resolution 1.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A
Query Conservation
Alig confidence																																														.	.	.	.															.	.	.
Template Conservation																																														.	.	.	.															.	.	.
Template Sequence		X	K	V	G	F	I	G	L	G	I	X	G	K	P	X	S	K	N	L	L	K	A	G	Y	S	L	V	V	S	D	R	N	P	E	A	I	A	D	V	I	A	A	G	A	.	.	.	.	E	T	A	S	T	A	K	A	I	A	E	Q	C	D	.	.	.	V	I	I	T	X	L	P	N	S	P	H	V	K	E	V
Template Known Secondary structure										S	T	T											T	T								S											T	T		.	.	.	.				S	S									S	.	.	.							S	S
Template Predicted Secondary structure																																														.	.	.	.															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		84				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.																																																						.
Query SS confidence			.	.	.																																																						.
Query Sequence		I	.	.	.	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I
Query Conservation			.	.	.																																																						.
Alig confidence			.	.	.																																																						.
Template Conservation
Template Sequence		A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	X	S	S	I	A	P	L	A	S	R	E	I	S	D	A	L	K	A	K	G	V	E	X	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	X	V	G	G	D	K	A	I	F	D	K	Y	Y	D	L	X	K	A	X
Template Known Secondary structure				S	T	T								T	T							S																T	T	T										S								T								S														T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I	F
Query Conservation
Alig confidence					.	.	.	.	.	.	.																																				.														.	.	.
Template Conservation					.	.	.	.	.	.	.																																				.														.	.	.
Template Sequence		A	G	S	.	.	.	.	.	.	.	V	V	H	T	G	D	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	X	S	E	A	L	T	L	A	.	T	K	A	G	V	N	P	D	L	V	Y	Q	A	.	.	.	I	R	G	G	L	A	G	S	T	V	L	D	A	K	A	P	X	V
Template Known Secondary structure					.	.	.	.	.	.	.						S	T	T																												.			T	T										.	.	.		T	T	S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.																																				.														.	.	.
Template SS confidence
		156	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	K	D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E	S	V	F	A
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		X	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	.	.	.	.	.	.	A	N	A	L	D	T	S	H	G	V	G	A	Q	L	P	L	T	A	A	V	X	E	X
Template Known Secondary structure			T	T					S	S	B									.	.	.	.	.	.											T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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