Job Description P00350 Confidence 96.67% Date Thu Jan 5 10:56:33 GMT 2012 Rank 365 Aligned Residues 121 % Identity 15% Template c1vi2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase 2; PDBTitle: crystal structure of shikimate-5-dehydrogenase with nad Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																												.																				.	.	.	.	.	.	.	.
Query SS confidence																												.																				.	.	.	.	.	.	.	.
Query Sequence		S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	.	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	.	.	.	.	.	.	.	.	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L
Query Conservation																												.																				.	.	.	.	.	.	.	.
Alig confidence																												.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	K	T	X	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N
Template Known Secondary structure		T	T									S													T	T										S	S																	S	S								T	T											S		S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		73	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		M	V	K	A	G	A	G	.	.	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G
Query Conservation									.	.
Alig confidence									.	.																						.	.
Template Conservation																																.	.
Template Sequence		G	T	K	V	G	X	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	.	.	V	Y	N	P	H	X	T	K	L	L	Q	Q	A	Q	Q	A	G	C	K	T	I	D
Template Known Secondary structure			S	S	T	T	S	T	T		T	T			S		S		G	G	G			T	T							.	.			S	S	S	S											T
Template Predicted Secondary structure																																.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions