Job Description P00350 Confidence 95.20% Date Thu Jan 5 10:56:33 GMT 2012 Rank 454 Aligned Residues 114 % Identity 16% Template c1v9lA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: l-glutamate dehydrogenase from pyrobaculum islandicum2 complexed with nad Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.											.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																.				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																.				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	.	I	F	N	.	.	.	.	.	.	.	.	.	.	R	S	R	E	K	T	E	E	V	I	A	E	N	.	.	.	.	.	.	.	.	.	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F
Query Conservation																																.				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence																																.				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	G	K	T	V	A	I	Q	G	M	G	N	V	G	R	W	T	A	Y	W	L	E	K	M	G	A	K	V	I	A	V	S	D	I	N	G	V	A	Y	R	K	E	G	L	N	V	E	L	I	Q	K	N	K	G	L	T	G	P	A	L	V	E	L	F	T	T	K	D	N	A	E	F	V	K	N	P	D	A	I
Template Known Secondary structure			T	T									S												T	T	T									S	S						T	T				T						T	T	T	S												T	S						S	S	T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I
Query Conservation
Alig confidence					.	.																							.	.	.	.	.														.	.
Template Conservation					.	.																							.	.	.	.	.														.	.
Template Sequence		F	K	L	.	.	D	V	D	I	F	V	P	A	A	I	E	N	V	I	R	G	D	N	A	G	L	V	.	.	.	.	.	K	A	R	L	V	V	E	G	A	N	G	P	T	.	.	T	P	E	A	E	R	I	L	Y	E	R	G	V	V	V	V
Template Known Secondary structure		G	G		.	.			S						S		S	S		B		T	T	T	T	T	T		.	.	.	.	.			S						S	S	S		B	.	.										T	T	T
Template Predicted Secondary structure					.	.																							.	.	.	.	.														.	.
Template SS confidence
		288	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions