Job Description P00350 Confidence 99.83% Date Thu Jan 5 10:56:33 GMT 2012 Rank 48 Aligned Residues 283 % Identity 17% Template c1txgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																															.	.														.	.	.	.	.	.
Query SS confidence																															.	.														.	.	.	.	.	.
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	.	.	N	R	S	R	E	K	T	E	E	V	I	A	E	.	.	.	.	.	.	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K
Query Conservation																															.	.														.	.	.	.	.	.
Alig confidence																															.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	V	S	I	L	G	A	G	A	M	G	S	A	L	S	V	P	L	V	D	N	G	N	E	V	R	I	W	G	T	E	F	D	T	E	I	L	K	S	I	S	A	G	R	E	H	P	R	L	G	V	K	L	N	G	V	E	I	F	W	P	E	Q	L	E	K	C	L	E	N	A	E	V	V	L	L	G	V	S
Template Known Secondary structure								S																									G	G	G									T	T			B	T	T	T	T	B				S						G	G	G						T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.																																								.
Query SS confidence																									.	.	.	.	.	.	.	.																																								.
Query Sequence		A	G	A	G	T	D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	.	.	.	.	.	.	.	.	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	K
Query Conservation																									.	.	.	.	.	.	.	.																																								.
Alig confidence		.																							.	.	.	.	.	.	.	.																																								.
Template Conservation		.
Template Sequence		.	T	D	G	V	L	P	V	M	S	R	I	L	P	Y	L	K	D	Q	Y	I	V	L	I	S	K	G	L	I	D	F	D	N	S	V	L	T	V	P	E	A	V	W	R	L	K	H	D	L	R	E	R	T	V	A	I	T	G	P	A	I	A	R	E	V	A	K	R	M	P	T	T	V	V	F	S	S	P	S	E
Template Known Secondary structure		.	G	G	G									T	T	T			S									S					T	T											T	T	S	T	T		G	G	G						S	S								T	T										S
Template Predicted Secondary structure		.
Template SS confidence
			81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																							.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	Q	L	I	A	E	A	Y	S	L	L
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		S	S	A	N	K	M	K	E	I	F	E	T	E	Y	F	G	.	.	.	.	.	.	.	V	E	V	T	T	D	I	I	G	T	E	I	T	S	A	L	K	N	V	Y	S	I	A	I	A	W	I	R	G	Y	E	S	R	K	N	V	E	M	S	N	A	K	G	V	I	A	T	R	A	I	N	E	M	A	E	L	I
Template Known Secondary structure													B	T	T			.	.	.	.	.	.	.					S																														T
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		205	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		K	G	G	L	N	L	T	N	E	E	.	.	.	.	.	.	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	.	.	.	.	.	D	I	F	T	K	K	D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L
Query Conservation												.	.	.	.	.	.																							.	.	.	.	.
Alig confidence			.									.	.	.	.	.	.																							.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation			.																																																														.	.	.	.	.	.	.
Template Sequence		E	.	I	L	G	G	D	R	E	T	A	F	G	L	S	G	F	G	D	L	I	A	T	F	R	G	G	R	N	G	M	L	G	E	L	L	G	K	G	L	S	I	D	E	A	M	E	E	L	E	R	R	G	V	G	V	V	E	G	Y	K	T	A	.	.	.	.	.	.	.	E	K	A	Y	R	L	S	S	K	I
Template Known Secondary structure			.			T	S		G	G	G	G	G	S	T	T	T							T	T	T													T	T													T	T											.	.	.	.	.	.	.										T
Template Predicted Secondary structure			.																																																														.	.	.	.	.	.	.
Template SS confidence
		233		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.								.	.	.	.	.	300	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	P	L	S	L	I	T	E	S	V	F	A	R	Y	I	S	S	L	K	D	Q	R	V	A	A	S	K	V	L	S
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		N	A	D	T	K	L	L	D	S	I	Y	.	.	R	V	L	Y	E	G	L	K	V	E	E	V	L	F	E	L	A	T
Template Known Secondary structure		T											.	.					S													T
Template Predicted Secondary structure													.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions