Job Description P00350 Confidence 99.84% Date Thu Jan 5 10:56:33 GMT 2012 Rank 47 Aligned Residues 285 % Identity 10% Template c1np3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ketol-acid reductoisomerase; PDBTitle: crystal structure of class i acetohydroxy acid isomeroreductase from2 pseudomonas aeruginosa Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T
Query Conservation
Alig confidence																																																	.	.	.	.															.	.	.
Template Conservation																																																	.	.	.	.															.	.	.
Template Sequence		I	Q	G	K	K	V	A	I	I	G	Y	G	S	Q	G	H	A	H	A	C	N	L	K	D	S	G	V	D	V	T	V	G	L	R	S	G	S	A	T	V	A	K	A	E	A	H	G	.	.	.	.	L	K	V	A	D	V	K	T	A	V	A	A	A	D	.	.	.	V	V	M	I	L	T	P	D	E	F	Q	G
Template Known Secondary structure				T	S						S		S												T	T	T									T	T		T	T							T	T	.	.	.	.												T		S	.	.	.						S
Template Predicted Secondary structure																																																	.	.	.	.															.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		D	A	A	I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		R	L	Y	K	E	E	I	E	P	N	L	K	K	G	A	T	L	A	F	A	H	G	F	S	I	H	Y	N	Q	V	V	P	R	A	D	L	D	V	I	M	I	A	P	K	A	P	G	H	T	V	R	S	E	F	V	K	G	G	G	I	P	D	L	I	A	I	Y	Q	D	A	S	G	N	A	K	N	V	A	L	S
Template Known Secondary structure								T	G	G	G			T	T						S	S						T	T	S					T	T	S								S	S		S								T	T	T													S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		P	S	I	M	P	G	G	Q	K	.	.	.	.	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V	A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																	.	.	.	.	.	.	.																																	.
Template Conservation																															.	.	.	.	.	.	.																																	.
Template Sequence		Y	A	C	G	V	G	G	G	R	T	G	I	I	E	T	T	F	K	D	E	T	E	T	D	L	F	G	E	Q	.	.	.	.	.	.	.	A	V	L	C	G	G	C	V	E	L	V	K	A	G	F	E	T	L	V	E	A	G	Y	A	P	E	M	A	Y	F	E	C	.	L	H	E	L	K	L	I	V	D	L	M
Template Known Secondary structure						T	T	G	G	G	T																				.	.	.	.	.	.	.		T	T	T																	T	T											.	T	T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.																																	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I	F	T	K	K	D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E	S	V	F	A	R	Y	I	S	S	L	K
Query Conservation
Alig confidence							.	.	.																													.
Template Conservation							.	.	.																													.
Template Sequence		Y	E	G	G	I	.	.	.	A	N	M	N	Y	S	I	S	N	N	A	E	Y	G	E	Y	V	T	G	P	E	V	I	N	A	E	S	R	.	A	A	M	R	N	A	L	K	R	I	Q	D	G	E	Y	A	K	M	F	I	T	E	G	A	A	N	Y	P	S	M	T	A	Y	R	R	N	N	A	A	H	P	I	E
Template Known Secondary structure							.	.	.							S																S						.												T	T												T	T	S												T	S
Template Predicted Secondary structure							.	.	.																													.
Template SS confidence
		239	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	R	V	A	A	S	K	V	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I	G	E	K	L	R	A	M	M	P
Template Known Secondary structure										T		T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions