Job Description P00350 Confidence 99.97% Date Thu Jan 5 10:56:33 GMT 2012 Rank 20 Aligned Residues 254 % Identity 20% Template c1i36A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein mth1747; PDBTitle: structure of conserved protein mth1747 of unknown function2 reveals structural similarity with 3-hydroxyacid3 dehydrogenases Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	G	V	V	G	M	A	V	M	G	R	N	L	A	L	N	I	E	S	R	G	Y	T	V	S	I	F	N	R	S	R	E	K	T	E	E	V	I	A	E	N	P	G	K	K	L	V	P	Y	Y	T	V	K	E	F	V	E	S	L	E	T	P	R	R	I	L	L	M	V	K	A	G	A	G	T	D	A	A
Query Conservation
Alig confidence																																														.	.	.	.															.	.	.
Template Conservation																																														.	.	.	.															.	.	.
Template Sequence		L	R	V	G	F	I	G	F	G	E	V	A	Q	T	L	A	S	R	L	R	S	R	G	V	E	V	V	T	S	L	E	G	R	S	P	S	T	I	E	R	A	R	T	V	.	.	.	.	G	V	T	E	T	S	E	E	D	V	Y	S	C	P	.	.	.	V	V	I	S	A	V	T	P	G	V	A	L	G	A	A
Template Known Secondary structure								S		S													T	T								T	T													.	.	.	.	T											T	S	S	.	.	.						S		G	G	G
Template Predicted Secondary structure																																														.	.	.	.															.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		I	D	S	L	K	P	Y	L	D	K	G	D	I	I	I	D	G	G	N	T	F	F	Q	D	T	I	R	R	N	R	E	L	S	A	E	G	F	N	F	I	G	T	G	V	S	G	G	E	E	G	A	L	K	G	.	P	S	I	M	P	G	G	Q	K	E	A	Y	E	L	V	A	P	I	L	T	K	I	A	A	V
Query Conservation																																																								.
Alig confidence				.	.	.																																.	.																	.																								.	.
Template Conservation				.	.	.																																.	.																																									.	.
Template Sequence		R	R	.	.	.	A	G	R	H	V	R	G	I	Y	V	D	I	N	N	I	S	P	E	T	V	R	M	A	S	S	L	I	E	K	G	G	.	.	F	V	D	A	A	I	M	G	S	V	R	R	K	G	A	D	I	R	I	I	A	S	G	R	D	A	E	E	F	M	K	L	N	R	Y	G	L	N	I	E	.	.
Template Known Secondary structure				.	.	.			T	T			S						S															S	S	S		.	.								S						G	G	G							S	T	T						G	G	G	G	G	T					.	.
Template Predicted Secondary structure				.	.	.																																.	.																																									.	.
Template SS confidence
		74	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	G	E	P	C	V	T	Y	I	G	A	D	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	A	E	A	Y	S	L	L	K	G	G	L	N	L	T	N	E	E	L	A	Q	T	F	T	E	W	N	N	G	E	L	S	S	Y	L	I	D	I	T	K	D	I	F	T	K	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																			.														.	.	.	.										.	.	.	.	.				.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																			.														.	.	.	.										.	.	.	.	.				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	R	G	R	E	P	G	D	A	S	A	I	K	M	L	R	S	S	Y	T	K	G	V	S	A	L	L	W	E	T	L	T	A	A	.	H	R	L	G	L	E	E	D	V	L	E	M	L	.	.	.	.	E	Y	T	E	G	N	D	F	R	.	.	.	.	.	E	S	A	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.			S	S	S	T	T																												.			T	T										.	.	.	.		T	T	S		S	S	T		.	.	.	.	.				.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																			.														.	.	.	.										.	.	.	.	.				.	.	.
Template SS confidence
										147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.						.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	G	N	Y	L	V	D	V	I	L	D	E	A	A	N	K	G	T	G	K	W	T	S	Q	S	A	L	D	L	G	E	P	L	S	L	I	T	E	S	V	F	A	R	Y	I	S	S	L	K	D	Q	R	V	A
Query Conservation
Alig confidence		.	.	.	.																																						.	.
Template Conservation		.	.	.	.																																						.	.
Template Sequence		.	.	.	.	I	S	R	L	K	S	S	C	I	H	A	R	R	R	Y	E	E	M	K	E	V	Q	D	M	L	A	E	V	I	D	P	V	M	P	T	C	I	.	.	I	R	I	F	D	K	L	K	D	A	R	L	Q
Template Known Secondary structure		.	.	.	.										T																	T	T	S			S						.	.										G	G	G	G
Template Predicted Secondary structure		.	.	.	.																																						.	.
Template SS confidence
						206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions