Return to main results Retrieve Phyre Job Id

Job DescriptionP00350
Confidence97.21%DateThu Jan 5 10:56:33 GMT 2012
Rank309Aligned Residues101
% Identity14%Templatec1ez4B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20....... ..30.........40.... .....50.........60.........70......
Predicted Secondary structure 









..

..

















Query SS confidence 


























. .
















. .































Query Sequence  MSKQQIGVVGMAVMGRNLALNIESRGY. . TVSIFNRSREKTEEVIA. . ENPGKKLVPYYTVKEFVESLETPRRILLMVKA
Query Conservation 
 

 






 

  

 

   
 .. 
 



       
  .. 

      
 
  
 
  
    



 

 
Alig confidence 


























..
















..































Template Conservation      

 




 

   
  
       

 
 
         
 

                  

  





  
 
Template Sequence  PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGA
Template Known Secondary structure  TTB


ST

S
SSGGGGGS




GGGGTT
S



Template Predicted Secondary structure 































Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   77 ..80.........90.........100..
Predicted Secondary structure  ...............








Query SS confidence 
. . . . . . . . . . . . . . .
























Query Sequence  G. . . . . . . . . . . . . . . AGTDAAIDSLKPYLDKGDIIIDGGN
Query Conservation   ...............  
  

  
   
  
 



 

Alig confidence 
...............













.









Template Conservation      
  
      
  
   
   
    .
 
 

  

Template Sequence  PQKPGESRLDLVNKNLNILSSIVKPVVDSG. FDGIFLVAAN
Template Known Secondary structure 


TT

TT.

S
SS
Template Predicted Secondary structure 






.



Template SS confidence 








































   99100.........110.........120........ .130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions