Job Description P16700 Confidence 99.65% Date Thu Jan 5 11:35:45 GMT 2012 Rank 75 Aligned Residues 264 % Identity 15% Template d1pc3a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.16

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	A	G	H	V	Q	A	T	E	L	L	N	S	S	Y	D	V	S	R	E	L	F	A	A	L	N	P	P	F	E	Q	Q	W	A	K	D	N	G	G	D	K	L	T	I	K	Q	S	H	A	G	S	S	K	Q	A	L	A	I	L	Q	G	L	K	A	D	V	V	T	Y	N	Q	V	T	D	V	Q	I	L
Query Conservation
Alig confidence																																						.	.	.	.	.	.																							.
Template Conservation																																						.	.	.	.	.	.																							.
Template Sequence		V	A	T	T	P	A	S	S	P	V	T	L	A	E	T	G	S	T	L	L	Y	P	L	F	N	L	W	G	P	A	F	H	E	R	Y	P	.	.	.	.	.	.	N	V	T	I	T	A	Q	G	T	G	S	G	A	G	I	A	Q	A	A	A	G	T	.	V	N	I	G	A	S	D	A	Y	L	S	E	G	D	M
Template Known Secondary structure					S			S	S										T	T	T															S	T	.	.	.	.	.	.	T							B												T	T	S	.		S					S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.																							.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.
Query Sequence		H	D	K	G	K	L	I	P	A	D	W	Q	S	R	L	P	N	N	S	S	P	F	Y	S	T	M	G	F	L	V	R	K	G	N	P	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	D	W	N	D	.	.	.	.	.	.	.	.	.	L	V	R	S	D	V	K	L	I	F	P	N
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	H	K	.	.	.	.	.	.	.	.	.	.	G	L	M	N	I	A	L	A	I	S	A	Q	Q	V	N	Y	N	L	P	G	V	S	E	H	L	K	L	N	G	K	V	L	A	A	M	Y	Q	G	T	I	K	T	W	D	D	P	Q	I	A	A	L	N	P	G	V	N	L	P	G	T	A	V	V	P	L	H
Template Known Secondary structure				S	T	.	.	.	.	.	.	.	.	.	.	T																		T	T			S															T	S			B	T	T								S	T	T							B
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	T	S	G	N	A	R	Y	T	Y	L	A	A	W	G	A	A	D	K	A	D	G	G	D	K	G	K	T	E	Q	F	M	T	Q	F	L	K	N	V	E	V	F	D	T	G	G	R	G	A	T	T	T	F	A	E	R	G	L	G	D	V	L	I	S	F	E	S	E	V	N	N	I	R	K	Q	Y	E	A	Q
Query Conservation
Alig confidence			.																																																																											.	.
Template Conservation			.																																																																											.	.
Template Sequence		R	.	S	D	G	S	G	D	T	F	L	F	T	Q	Y	L	S	K	Q	D	P	E	G	W	G	K	S	P	G	F	G	T	T	V	D	F	P	A	V	P	G	A	L	G	E	N	G	N	G	G	M	V	T	G	C	A	E	T	P	G	C	V	A	Y	I	G	I	S	F	L	D	Q	A	S	Q	R	.	.	G	L
Template Known Secondary structure			.	S	S																	T	T	T	T	T	T	T	T			S	S	S							T	T																	S	T	T							G	G	G							T	.	.	T
Template Predicted Secondary structure			.																																																																											.	.
Template SS confidence
		162		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.
		232	.	.	.	.	.	.	.	240	.	.	.																																		.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		G	F	E	V	V	I	P	K	T	N	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	F	P	V	A	W	V	D	K	N	.	.	.	.	.	V	Q	A	N	G	T	E	K	A	A	K	A	Y	L	N	W	L	Y	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		G	E	A	Q	L	G	N	S	S	G	N	F	L	L	P	D	A	Q	S	I	Q	A	A	A	A	G	F	A	S	K	T	P	A	N	Q	A	I	S	M	I	D	G	P	A	P	D	G	Y	P	I	I	N	Y	E	Y	A	I	V	N	N	R	Q	K	D	A	A	T	A	Q	T	L	Q	A	F	L	H	W	A	I	T
Template Known Secondary structure									T	T	S						S									T	T	T	T	T				T	T						T	T		S		T	T			S											S	B		S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		274	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		P	Q	A	Q	T	.	I	I	T	D	Y	Y	Y	R	V	N	N	P	E	V	M	D	K	L	K	D	K	F
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		D	G	N	K	A	S	F	L	D	Q	V	H	F	Q	P	L	P	P	A	V	V	K	L	S	D	A	L	I
Template Known Secondary structure		G	G	G	S								T		B
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions