Job Description P16700 Confidence 24.18% Date Thu Jan 5 11:35:45 GMT 2012 Rank 130 Aligned Residues 145 % Identity 15% Template d1jnfa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.60

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Y	D	V	S	R	E	L	F	A	A	L	N	P	P	F	E	Q	Q	W	A	K	D	N	G	G	D	K	L	T	I	K	Q	S	H	A	G	S	S	K	Q	A	L	A	I	L	Q	G	L	K	A	D	V	V	T	Y	N	Q	V	T	D	V	Q	I	L	H	D	K	G	K	L	I	P	A	D	W	Q	S	R
Query Conservation
Alig confidence																																					.	.	.												.
Template Conservation																																					.	.	.												.
Template Sequence		A	V	N	D	H	E	A	S	K	C	A	N	F	R	D	S	M	K	K	V	L	P	E	D	G	P	R	I	I	C	V	K	K	A	S	.	.	.	Y	L	D	C	I	K	A	I	A	A	H	.	E	A	D	A	V	T	L	D	A	G	L	V	H	E	A	G	L	T	P	N	N	L	K	P	V	V	A	E	F	Y
Template Known Secondary structure																						S		T	T	S									S	S	.	.	.										T	T	.	S			B													S	T	T	T										B
Template Predicted Secondary structure																																					.	.	.												.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	N	N	S	S	P	F	Y	S	T	M	G	F	L	V	R	K	G	N	P	K	N	I	H	D	W	N	D	L	V	R	S	D	V	K	L	I	F	P	N	P	K	T	S	G	N	A	R	Y	T	Y	L	A	A	W	G	A	A	D	K	A	D	G	G	D	K	G	K	T	E	Q	F	M
Query Conservation
Alig confidence																								.	.	.						.	.
Template Conservation																								.	.	.						.	.
Template Sequence		G	S	K	E	N	P	K	T	F	Y	Y	A	V	A	L	V	K	K	G	S	N	F	.	.	.	Q	L	N	E	L	.	.	Q	G	K	K	S	C	H	T	G	L	G	R	S	A	G	W	N	I	P	I	G	L	L	L	C	D	L	P	E	P	R	K	P	L	E	K	A	V	A	S	F	F
Template Known Secondary structure		S		S	S	S		B	S										T	T				.	.	.		G	G	G		.	.	T	T						S		T	T		T	T	T	T								G	G	G	S		S			S	S									S
Template Predicted Secondary structure																								.	.	.						.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions