Job Description P16700 Confidence 99.77% Date Thu Jan 5 11:35:45 GMT 2012 Rank 69 Aligned Residues 270 % Identity 14% Template d1elja_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	A	T	E	L	L	N	S	S	Y	D	V	S	R	E	L	F	A	A	L	N	P	P	F	E	Q	Q	W	A	K	D	N	G	G	D	K	L	T	I	K	Q	S	H	A	G	S	S	K	Q	A	L	A	I	L	Q	G	L	K	A	D	V	V	T	Y	N	Q	V	T	D	V	Q	I	L	H	D	K	G	K	L
Query Conservation
Alig confidence																																	.																																		.
Template Conservation																																	.																																		.
Template Sequence		M	K	I	E	E	G	K	V	V	I	W	H	A	M	Q	P	N	E	L	E	V	F	Q	S	L	A	E	E	Y	M	A	.	L	P	E	V	E	I	V	F	E	Q	K	P	N	L	E	D	A	L	K	A	A	I	P	T	G	Q	G	P	D	L	F	I	W	.	A	H	D	W	I	G	K	F	A	E	A	G	L	L
Template Known Secondary structure																																	.												T	T									T	T	T	T		S		S					.		G	G	G							T	T		B
Template Predicted Secondary structure																																	.																																		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.
		103	.																				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	W	Q	S	R	L	P	N	N	S	S	P	F	Y	S	T	M	G	F	L	V	R	K	G	N	P	K	N	.	I	H	D	W	N	D	L	V	R	S	D	V	K	L	I	F	P	N	P	K	T	S	G	N	A	R	Y	T	Y
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		E	P	I	D	E	Y	V	T	E	D	L	L	N	E	F	A	P	M	A	Q	D	A	M	Q	Y	K	G	H	Y	Y	A	L	P	F	A	A	E	T	V	A	I	I	Y	N	K	E	M	V	S	E	P	P	K	T	F	D	E	M	K	A	I	M	E	K	Y	Y	D	P	A	N	E	K	Y	G	I	A	W	P	I	N
Template Known Secondary structure					T	T	T							T	T	B								T			T	T																		T	T	T		S	S			S	S													B	G	G	G	T	B		S		B				S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.																.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	W	G	A	A	D	K	A	D	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	K	T	E	Q	F	M	T	Q	F	L	K	N	V	E	V	F	D	T	G	G	R	G	A	T	T	T	F	A	E	R	G	L	G	D	V	L	I	S	F	E	S	E	V	N	N	I	R	K	Q
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																											.
Template Sequence		A	Y	F	I	S	A	I	A	Q	A	F	G	G	Y	Y	F	D	D	K	T	E	Q	P	G	L	D	K	P	E	T	I	E	G	F	K	F	F	F	T	E	I	W	P	Y	M	A	P	T	G	D	Y	N	T	Q	Q	S	I	.	F	L	E	G	R	A	P	M	M	V	N	G	P	W	S	I	N	D	V	K	K	A
Template Known Secondary structure										T	T	T	S			S			T	T	T	T				T	T	S														T	G	G	G	S		S											.			T	T	S	S	S						G	G	G							T
Template Predicted Secondary structure																																																											.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																																							.	.
Query SS confidence															.	.	.	.	.																																							.	.
Query Sequence		Y	E	A	Q	G	F	E	V	V	I	P	K	T	.	.	.	.	.	N	I	L	A	E	F	P	V	A	W	V	D	K	N	V	Q	A	N	G	T	E	K	A	A	K	A	Y	L	N	W	L	Y	S	P	Q	A	Q	T	.	.	I	I	T	D	Y	Y	Y	R	V	N	N	P	E	V	M	D	K
Query Conservation															.	.	.	.	.																																							.	.
Alig confidence															.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		G	I	N	F	G	V	V	P	L	P	P	I	I	K	D	G	K	E	Y	W	P	R	P	Y	G	G	V	K	L	I	Y	F	A	A	G	I	K	N	K	D	A	A	W	K	F	A	K	W	L	T	T	S	E	E	S	I	K	T	L	A	L	E	L	G	Y	I	P	V	L	T	K	V	L	D	D
Template Known Secondary structure		T														T	T																	B	T	T		S																													B			B	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions