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Job DescriptionP16700
Confidence92.00%DateThu Jan 5 11:35:45 GMT 2012
Rank103Aligned Residues188
% Identity12%Templatec3uifA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60...... ...70.........80.........90.........100.........110.........120.
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Query Sequence  LNPPFEQQWAKDNGGDKLTIKQSH. AGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYST
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Template Sequence  FPEELRKQ. . . . . . GIKVEWVPAAXASVGPVINEGFASGKIDFGIYGDLPPIILNASKP. . . . . . . . TVQLVAPWGTTSN
Template Known Secondary structure  T......T
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   57..60.... .....70.........80.........90.........100......... 110.........120..
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  MGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGA
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Template Sequence  SYLVVPKN. . STAKSIKDL. . KGKKIALHR. . GRPWELAFSNLLQSEGLTFKD. . . . . . . . . . . . . . . . . FKIVNVNPQV
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SGGGG..TTS
T..TSTTT

GGG.................S


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   123......130 ......... 140........ .150.........160......... 170.........
 
   202.......210.........220.........230.........240.........250.........260.........
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Query Sequence  TTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLN
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Template Sequence  GAAALASGTVDGFFSLFDSYILEDRG. . VGKIIWSTKTAPVDWKLXGGVWARNDFVKQNPEITQAIVT
Template Known Secondary structure  TSSSSTTTT..SGGGS
GGGS


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   180.........190.........200..... ....210.........220.........230.........240.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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