Job Description P16700 Confidence 99.80% Date Thu Jan 5 11:35:45 GMT 2012 Rank 61 Aligned Residues 261 % Identity 12% Template c3oo6A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:abc transporter binding protein acbh; PDBTitle: crystal structures and biochemical characterization of the bacterial2 solute receptor acbh reveal an unprecedented exclusive substrate3 preference for b-d-galactopyranose Resolution 2.15 Å

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		27	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure												.	.	.																															.
Query SS confidence												.	.	.																															.
Query Sequence		E	L	L	N	S	S	Y	D	V	S	.	.	.	R	E	L	F	A	A	L	N	P	P	F	E	Q	Q	W	A	K	D	N	G	G	D	K	L	T	I	K	Q	S	H	.	A	G	S	S	K	Q	A	L	A	I	L	Q	G	L	K	A	D	V	V	T	Y	N	Q	V	T	D	V	Q	I	L	H	D	K	G	K	L
Query Conservation												.	.	.																															.
Alig confidence												.	.	.															.	.	.	.	.												.
Template Conservation																													.	.	.	.	.
Template Sequence		P	I	T	F	G	S	N	Y	S	D	E	A	P	K	A	A	F	A	S	L	M	Q	Q	A	T	T	S	.	.	.	.	.	T	T	V	P	V	T	V	N	T	T	D	H	N	T	F	Q	N	N	I	S	N	Y	L	Q	G	T	P	D	S	L	A	T	W	F	A	G	Y	R	L	Q	F	F	A	A	Q	G	L	L
Template Known Secondary structure											S																		.	.	.	.	.																		T							S				S							T								T	T	T		B
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		103	.																				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	W	Q	S	R	L	P	N	N	S	S	P	F	Y	S	T	M	G	F	L	V	R	K	G	.	.	.	.	.	N	P	K	N	I	H	D	W	N	D	L	V	R	.	.	.	.	.	.	.	S	D	V	K	L	I	F	P	N
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	I	D	D	V	W	D	K	I	G	G	T	F	N	D	A	A	K	S	L	S	K	G	L	D	G	H	Y	Y	L	V	P	L	Y	N	Y	P	W	V	V	F	Y	N	K	S	V	F	Q	S	K	G	Y	E	V	P	A	S	W	E	A	F	I	A	L	A	R	K	M	Q	S	D	G	L	V	P	L	A	F	A
Template Known Secondary structure												G	G	G	S							T	T	B		T	T	S		B																							T						B														T	T	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		P	K	T	S	G	N	A	R	Y	T	Y	L	A	A	W	G	A	A	D	K	A	D	G	G	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	E	Q	F	M	T	Q	F	L	K	N	V	E	V	F	D	.	T	G	G	R	G	A	T	T	T	F	A	E	R	G	L	G	D	V	L	I	S	F
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		D	K	D	G	W	P	A	L	G	T	F	D	I	L	N	L	R	I	N	G	Y	D	Y	H	I	K	L	M	K	H	E	V	P	W	T	D	P	G	V	T	K	V	F	D	Q	W	R	E	L	A	A	Y	Q	Q	K	G	A	N	G	R	T	W	Q	D	A	A	K	A	L	E	N	K	Q	A	G	M	M	F	Q	G
Template Known Secondary structure			T	T	S	S	T	T												T										T	T	S	S		T	T	S															T	T	B		S	S	G	G	G												T	T	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																			.	.	.	.	.																																	.
Query SS confidence																																			.	.	.	.	.																																	.
Query Sequence		E	S	E	V	N	N	I	R	K	Q	Y	E	A	Q	G	F	E	V	V	I	P	K	T	N	I	L	A	E	F	P	V	A	W	.	.	.	.	.	V	D	K	N	V	Q	A	N	G	T	E	K	A	A	K	A	Y	L	N	W	L	Y	S	P	Q	A	Q	T	I	I	T	D	.	Y	Y	Y	R	V	N	N	P	E
Query Conservation																																			.	.	.	.	.																																	.
Alig confidence																																			.	.	.	.	.																																	.
Template Conservation
Template Sequence		S	N	Q	V	A	A	N	Y	S	A	K	N	L	P	D	L	D	F	F	V	F	P	A	I	N	P	Q	Y	G	T	D	Y	M	D	A	P	T	D	G	F	I	L	P	K	K	G	K	N	A	A	A	A	K	K	V	L	Q	Y	I	G	T	A	E	A	E	A	A	F	L	K	T	D	H	W	D	V	G	L	A	N
Template Known Secondary structure									S		T	T	T	G	G	G								B			T	T	T	T	T													B	T	T		S													T	S									T	T			S	S					T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		292
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		333

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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