Job Description P16700 Confidence 99.97% Date Thu Jan 5 11:35:45 GMT 2012 Rank 6 Aligned Residues 229 % Identity 15% Template c3lr1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate- PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Q	A	T	E	L	L	N	S	S	Y	D	V	S	R	E	.	.	L	F	A	A	L	N	P	P	F	E	Q	Q	W	A	K	D	N	G	G	D	K	L	T	I	K	Q	S	H	A	G	S	S	K	Q	A	L	A	I	L	Q	G	L	K	A	D	V	V	T	Y	N	Q	V	T	D	V	Q	I	L	H	D	K	G	K
Query Conservation																	.	.
Alig confidence																	.	.													.	.	.	.	.	.	.																								.
Template Conservation																															.	.	.	.	.	.	.																								.
Template Sequence		A	E	E	R	L	K	X	S	T	T	T	S	T	Q	D	S	G	L	L	K	V	L	L	P	P	F	E	K	K	.	.	.	.	.	.	.	N	N	V	K	V	D	V	I	A	V	G	T	G	Q	A	L	K	L	G	E	A	G	D	.	V	D	V	V	F	V	H	A	R	K	L	E	D	K	F	V	A	D	G	F
Template Known Secondary structure			S																												.	.	.	.	.	.	.		T																			T	T	S	.		S																T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.																								.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	P	A	D	W	Q	S	R	L	P	N	N	S	S	P	F	Y	S	T	M	G	F	L	V	R	K	G	N	P	K	N	I	H	D	W	N	D	L	V	R	S	D	V	K	L	I	F	P	N	P	K	T	S	G	N	A	R	Y	T	Y	L	A	A	W	G	A	A	D	K	A	D	G	G	D	K	G	K	T	E
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.																																																																.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																																																.	.	.	.	.	.
Template Sequence		G	V	.	.	.	.	.	.	.	.	.	N	R	K	D	V	X	Y	N	D	F	V	I	V	G	P	K	N	D	P	A	G	I	A	K	A	K	T	A	A	E	A	L	K	L	L	A	T	K	G	A	T	F	I	S	R	G	D	K	S	G	T	H	T	K	E	L	D	L	W	K	S	A	G	.	.	.	.	.	.
Template Known Secondary structure				.	.	.	.	.	.	.	.	.																T	T		T	T		G	G	G		S	S												T								S	S	S													T	T	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																																																.	.	.	.	.	.
Template SS confidence
		72	.										.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	M	T	Q	F	L	K	N	V	E	V	F	D	T	G	G	R	G	A	T	T	T	F	A	E	R	G	L	G	D	V	L	I	S	F	E	S	E	V	N	N	I	R	K	Q	Y	E	A	Q	G	F	E	V	V	I	P	K	T	N	I	L	A	E	F	P	V	A	W	V	D	K	N	V	Q	A	N	G	T	E
Query Conservation
Alig confidence		.	.	.	.	.																			.																							.	.
Template Conservation		.	.	.	.	.																			.																							.	.
Template Sequence		.	.	.	.	.	V	D	P	K	G	N	W	Y	V	E	A	G	Q	G	X	G	P	V	.	I	T	X	A	T	E	R	R	A	Y	T	L	T	D	R	G	T	Y	N	A	F	K	.	.	G	A	K	T	D	L	V	I	L	F	Q	G	L	F	N	P	Y	G	I	X	A	V	N	P	K	K	F	P	H	V	K	Y
Template Known Secondary structure		.	.	.	.	.					S	S	S						S						.								T														B	.	.	T	T	T	B																				T	T	T		T	T	S
Template Predicted Secondary structure		.	.	.	.	.																			.																							.	.
Template SS confidence
							137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	A	K	A	Y	L	N	W	L	Y	S	P	Q	A	Q	T	I	I	T	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	A	X	K	L	I	D	Y	V	T	G	P	E	G	L	K	I	I	S	D	Y
Template Known Secondary structure												T	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions