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Job DescriptionP16700
Confidence97.90%DateThu Jan 5 11:35:45 GMT 2012
Rank84Aligned Residues235
% Identity10%Templatec3k2dA_
PDB info PDB header:immune systemChain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GHVQATELLNSSYDVSR. ELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDK
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Template Sequence  GHMDTSKVKVGVMAGAEAQVAEVAAKVAKEKY. . . . . GLDVELVTFTDYV. TPNAALDDG. SIDMNAFQHKPYLDRQVED
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Query Sequence  GKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGK
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Template Sequence  R. . . . . . . . . . . . DYKLTIAGNTFVYPIAGYSKQVKSVAAL. . . . ADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVG
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Query Sequence  TEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANG
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Template Sequence  LLATVRDIVENPKNITIMELDAAQLPRSLDDVALSIINTTYASSINLTPEKDGVFVED. . . . . . KESPYVNLIVARQDNV
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   163......170.........180.........190.........200.........210.........220 .........230......
 
   260.........270.........280....
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Query Sequence  TEKAAKAYLNWLYSPQAQTIITDYY
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Template Sequence  QNENVQNFVKAYQTEEVYTAAKEIF
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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