Job Description P16700 Confidence 99.97% Date Thu Jan 5 11:35:45 GMT 2012 Rank 7 Aligned Residues 230 % Identity 13% Template c3fj7A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3 Resolution 1.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	N	S	S	Y	D	V	S	R	E	L	F	A	A	L	N	P	P	F	E	Q	Q	W	A	K	D	N	G	G	D	K	L	T	I	K	Q	S	H	A	G	S	S	K	Q	A	L	A	I	L	Q	G	L	K	A	D	V	V	T	Y	N	Q	V	T	D	V	Q	I	L	H	D	K	G	K	L	I	P	A	D
Query Conservation
Alig confidence																										.	.	.	.	.	.	.																								.	.
Template Conservation																										.	.	.	.	.	.	.																								.	.
Template Sequence		D	V	N	L	Y	G	P	G	G	P	H	T	A	L	K	D	I	A	N	K	Y	S	E	K	.	.	.	.	.	.	.	T	G	V	K	V	N	V	N	F	G	P	Q	A	T	W	F	E	K	A	K	K	D	A	.	.	D	I	L	F	G	A	S	D	Q	S	A	L	A	I	A	S	D	F	G	K	D	F	N	V
Template Known Secondary structure									T	T	T															.	.	.	.	.	.	.										S		G	G	G	T									.	.	S					S	S										T	T	G	G	G	S		G
Template Predicted Secondary structure																										.	.	.	.	.	.	.																								.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.								.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	S	R	L	P	N	N	S	S	P	F	Y	S	T	M	G	F	L	V	R	K	G	N	P	K	N	I	H	D	W	N	D	L	V	R	S	D	V	K	L	I	F	P	N	P	K	T	S	G	N	A	R	Y	T	Y	L	A	A	W	G	A	A	D	K	A	D	G	G	D	K	G	K	T	E	Q	F	M	T	Q
Query Conservation
Alig confidence		.	.	.	.	.																																																										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																										.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	S	K	I	K	P	L	Y	F	R	E	A	I	I	L	T	Q	K	G	N	P	L	K	I	K	G	L	K	D	L	A	N	K	K	V	R	I	V	V	P	E	G	A	G	K	S	N	T	S	G	T	G	V	W	E	D	M	I	.	.	.	.	.	.	.	G	R	T	Q	D	I	K	T	I	Q	N
Template Known Secondary structure		.	.	.	.	.	G	G														S	T	T		T	T				S							S										T	T	S	S			T	T	T	T							.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure		.	.	.	.	.																																																										.	.	.	.	.	.	.
Template SS confidence
							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	K	N	V	E	V	F	D	T	G	G	R	G	A	T	T	T	F	A	E	R	G	L	G	D	V	L	I	S	F	E	S	E	V	N	N	I	R	K	Q	Y	E	A	Q	G	F	E	V	V	I	P	K	T	N	I	L	A	E	F	P	V	A	W	V	D	K	N	V	Q	A	N	G	T	E	K	A	A	K	A
Query Conservation
Alig confidence																				.																			.	.	.	.	.	.															.	.	.
Template Conservation																				.																			.	.	.	.	.	.															.	.	.
Template Sequence		F	R	N	N	I	V	A	F	V	P	N	S	G	S	A	R	K	L	.	F	A	Q	D	Q	A	D	A	W	I	T	W	I	D	W	S	K	S	.	.	.	.	.	.	N	P	D	I	G	T	A	V	A	I	E	K	D	L	.	.	.	V	V	Y	R	T	F	N	V	I	A	K	E	G	A	S	K	E	T	Q	D
Template Known Secondary structure					T						S	S								.			T	T			S												.	.	.	.	.	.		T	T	S								T	T	T	.	.	.												T	T
Template Predicted Secondary structure																				.																			.	.	.	.	.	.															.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	N	W	L	Y	S	P	Q	A	Q	T	I	I	T	D	Y	Y	Y	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	A	Y	L	S	S	K	E	A	K	E	I	F	K	K	Y	G	W	R	E
Template Known Secondary structure						T	T	S										T	T		B
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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