Job Description P16700 Confidence 97.80% Date Thu Jan 5 11:35:45 GMT 2012 Rank 85 Aligned Residues 178 % Identity 13% Template c3cvgC_ PDB info PDB header:metal binding protein Chain: C: PDB Molecule:putative metal binding protein; PDBTitle: crystal structure of a periplasmic putative metal binding protein Resolution 1.97 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.															.	.	150
Predicted Secondary structure																																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Y	N	Q	V	T	D	V	Q	I	L	H	D	K	G	K	L	I	P	A	D	W	Q	S	R	L	P	N	N	S	S	P	F	Y	.	S	T	M	G	F	L	V	R	K	G	N	P	K	N	I	H	D	W	N	D	L	V	R	S	D	V	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	P
Query Conservation																																				.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.								.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.
Template Sequence		I	T	Y	S	P	V	A	E	R	I	S	I	K	H	G	I	S	E	.	.	.	.	.	.	.	.	.	S	P	S	Y	Y	A	F	R	D	H	F	X	L	I	G	P	P	S	N	P	A	K	L	S	G	D	S	D	I	A	D	X	F	S	K	X	H	D	A	A	E	A	G	N	T	K	P	P	V	R	F	L	S
Template Known Secondary structure			B	S											T	T	S	S		.	.	.	.	.	.	.	.	.																	T	T		T	T				S	S																			S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	K	T	S	G	N	A	R	Y	T	Y	L	A	A	W	G	A	A	D	K	A	D	G	G	D	K	G	K	T	E	Q	F	M	T	Q	F	L	K	N	V	E	V	F	D	T	G	G	R	G	A	T	T	T	F	A	E	R	G	L	G	D	V	L	I	S	F	E	S	E	V	N	N	I	R	K	Q	Y	E	A
Query Conservation
Alig confidence									.																								.	.	.	.	.	.	.	.	.	.															.
Template Conservation									.																								.	.	.	.	.	.	.	.	.	.															.
Template Sequence		R	Y	D	K	S	A	T	.	N	I	K	E	A	E	L	W	L	S	I	G	Q	V	P	W	A	T	A	Y	S	T	W	.	.	.	.	.	.	.	.	.	.	Y	H	Q	Y	I	T	F	P	I	Q	A	L	T	A	.	A	I	L	L	R	E	Y	T	I	T	D	Y	G	T	Y	L	S	I	P	R	G	L	R	D
Template Known Secondary structure				S	S				.										T	T	T			T	T	S	S	S			T	T	.	.	.	.	.	.	.	.	.	.						S									.				T	T											T	T	S						T
Template Predicted Secondary structure									.																								.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		168	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		Q	G	F	E	V	V	I	P	K	T	N	I	L	A	E	F	P	V	A	W	V	D	K	N	V	Q	A	N	G	T	E	K	A	A	K	A	Y	L	N	W	L	Y	S	P	Q	.	A	Q	T	I	I	T	D	Y	Y
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		Q	X	V	I	Y	K	K	G	T	N	D	A	D	D	P	L	L	N	P	A	H	L	L	V	G	A	R	A	K	N	A	E	X	A	K	E	F	A	K	W	L	V	S	K	E	G	G	Q	K	V	I	E	G	F	K
Template Known Secondary structure		T									S		T	T		T	T										S	S		S	S	T	T										T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions