 |
| Job Description | P0AF16 | | Confidence | 1.31% | Date | Thu Jan 5 11:24:53 GMT 2012 |
| Rank | 26 | Aligned Residues | 32 |
| % Identity | 22% | Template | c2k1aA_ |
| PDB info |
PDB header:cell adhesion | Chain: A: PDB Molecule:integrin alpha-iib; |
PDBTitle: bicelle-embedded integrin alpha(iib) transmembrane segment
|
| Resolution | UNK |
|
| | |
479 | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | | |
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | R | L | M | A | V | V | L | A | G | I | A | A | Y | F | A | A | L | A | V | L | G | F | K | V | K | E | F | A | R | R | T |
| Query Conservation | |
| |
| | | | | | |
| | | |
| | | | | | |
| | | | | |
| | |
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
| |
|
|
|
|
| | |
|
| | |
|
|
| |
|
|
|
|
| |
|
| Template Sequence | |
I | W | W | V | L | V | G | V | L | G | G | L | L | L | L | T | I | L | V | L | A | M | W | K | V | G | F | F | K | R | N | R |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | T | T | T | T |
|
|
|
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
966 | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
