Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF16
Confidence3.54%DateThu Jan 5 11:24:53 GMT 2012
Rank9Aligned Residues8
% Identity63%Templatec1cqtJ_
PDB info PDB header:gene regulation/dnaChain: J: PDB Molecule:pou domain, class 2, associating factor 1; PDBTitle: crystal structure of a ternary complex containing an oca-b2 peptide, the oct-1 pou domain, and an octamer element
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   503......510
Predicted Secondary structure 
Query SS confidence 







Query Sequence  VKEFARRT
Query Conservation    
  

 
Alig confidence 







Template Conservation 







Template Sequence  VKELLRRK
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   812.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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