Job Description P04395 Confidence 96.86% Date Thu Jan 5 10:58:16 GMT 2012 Rank 24 Aligned Residues 78 % Identity 15% Template d2noha2 SCOP info TBP-like TATA-box binding protein-like DNA repair glycosylase, N-terminal domain Resolution 2.01

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		E	T	V	A	D	S	Y	Y	A	R	S	L	A	V	G	E	Y	R	G	V	V	T	A	I	P	D	I	A	R	H	T	L	H	I	N	L	S	A	G	L	E	P	V	A	A	E	C	L	A	K	M	S	R	L	F	D	L	Q	C	N	P	Q	I	V	.	.	.	.	.	.	.	N	G	A	L	G	R	L	G	A
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence														.	.	.	.																												.																					.	.	.	.	.	.	.
Template Conservation														.	.	.	.																												.
Template Sequence		R	E	Q	S	P	A	H	W	S	G	V	L	.	.	.	.	A	D	Q	V	W	T	L	T	Q	T	E	E	Q	L	H	C	T	V	Y	R	S	Q	A	S	R	P	T	.	P	D	E	L	E	A	V	R	K	Y	F	Q	L	D	V	T	L	A	Q	L	Y	H	H	W	G	S	V	D	S	H	F	Q	E	V	A	Q
Template Known Secondary structure						T	T							.	.	.	.	T	T									S	S																.											T	T	T	T	S
Template Predicted Secondary structure														.	.	.	.																												.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		101	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	P	G	L	R	L	P	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	Q	G	V	R	L	L	R	Q
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions