Job Description P04395 Confidence 100.00% Date Thu Jan 5 10:58:16 GMT 2012 Rank 10 Aligned Residues 163 % Identity 23% Template d2noha1 SCOP info DNA-glycosylase DNA-glycosylase DNA repair glycosylase, 2 C-terminal domains Resolution 2.01

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	.	.	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A
Query Conservation																																						.	.
Alig confidence																																						.	.
Template Conservation
Template Sequence		D	P	I	E	C	L	F	S	F	I	C	S	S	N	N	N	I	A	R	I	T	G	M	V	E	R	L	C	Q	A	F	G	P	R	L	I	Q	L	D	D	V	T	Y	H	G	F	P	S	L	Q	A	L	A	G	P	E	V	E	A	H	L	R	K	L	G	L	G	Y	R	A	R	Y	V	S	A	S	A	R	A	I
Template Known Secondary structure												T	T	T	T	S																	S							T	T														S	T	T								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.														.	250	.
Predicted Secondary structure						.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	G	T	.	.	.	.	.	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	A
Query Conservation						.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.																																												.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		L	E	E	Q	G	G	L	A	W	L	Q	Q	L	R	E	S	S	Y	E	E	A	H	K	A	L	C	I	L	P	G	V	G	T	Q	V	A	D	C	I	C	L	M	A	L	D	K	P	Q	A	V	P	V	.	D	V	H	M	W	H	I	A	Q	R	D	Y	S	W	H	P	T	T	S	Q	A	K	G	P	S	P	Q
Template Known Secondary structure				T	S		S							T	T	T	S										T	T	S	T	T														S			T	T					.																	S	S	S	S		S	S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		252	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		Q	I	R	R	Y	A	.	.	.	.	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W	Y	T	E
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.
Template Conservation
Template Sequence		T	N	K	E	L	G	N	F	F	R	S	L	W	G	P	Y	A	G	W	A	A	A	V	L	F	S	A	D
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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