Job Description P04395 Confidence 99.95% Date Thu Jan 5 10:58:16 GMT 2012 Rank 15 Aligned Residues 166 % Identity 22% Template d2abka_ SCOP info DNA-glycosylase DNA-glycosylase Endonuclease III Resolution 1.85

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		N	P	Q	I	V	N	G	A	L	G	R	L	G	A	A	R	P	G	L	R	L	P	.	G	C	V	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D
Query Conservation																								.
Alig confidence																								.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	A	K	R	L	E	I	L	T	R	L	R	E	N	N	P	H	P	T	T	E	L	N	F	S	S	P	F	E	L	L	I	A	V	L	L	S	A	Q	A	T	D	V	S	V	N	K	A	T	A	K	L	Y	P	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	P	A	A	M	L	E	L	G
Template Known Secondary structure																		S	S				S	S			S	S											T	T	T	S													T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.	.
		166	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		P	Q	A	L	.	.	.	.	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																							.	.	.	.	.																																			.						.
Template Conservation																																.	.	.	.	.																																			.						.
Template Sequence		V	E	G	V	K	T	Y	I	K	T	I	G	L	Y	N	S	K	A	E	N	I	I	K	T	C	R	I	L	L	E	.	.	.	.	.	Q	H	N	G	E	V	P	E	D	R	A	A	L	E	A	L	P	G	V	G	R	K	T	A	N	V	V	L	N	T	A	F	G	W	.	P	T	I	A	V	.	D	T	H	I
Template Known Secondary structure										T	T	S	T	T																		.	.	.	.	.		T	T	T	S			S								S	T	T																	.						.
Template Predicted Secondary structure																																.	.	.	.	.																																			.						.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.		.	.	140	.
		242	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		K	Q	R	F	P	G	M	.	.	.	.	.	.	T	P	A	Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	V	C	N	R	T	Q	F	A	P	G	K	N	V	E	Q	V	E	E	K	L	L	K	V	V	P	A	E	F	K	V	D	C	H	H	W
Template Known Secondary structure										S	S			S	S												S		G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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