Job Description P04395 Confidence 99.89% Date Thu Jan 5 10:58:16 GMT 2012 Rank 20 Aligned Residues 162 % Identity 17% Template d1rrqa1 SCOP info DNA-glycosylase DNA-glycosylase Mismatch glycosylase Resolution 2.22

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	N	G	A	L	G	R	L	G	A	A	R	P	G	L	R	L	P	G	C	V	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	F	Q	R	D	L	L	D	W	F	A	R	E	R	R	D	L	P	W	R	K	D	R	D	P	Y	K	V	W	V	S	E	V	M	L	Q	Q	T	R	V	E	T	V	I	P	Y	F	E	Q	F	I	D	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	L	E	A	L	A	D	A	D	E	D	E
Template Known Secondary structure																			G	G	G	S															T	T	S																S	.	.	.	.	.	.	.	.	.	.	.	.	.		S							S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.														.	.	.	.	70	.	.	.	.	.	.	.	.
		169					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		L	.	.	.	.	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.						.																		.	.	.	.	.																																				.				.
Template Conservation												.																		.	.	.	.	.																																				.				.
Template Sequence		V	L	K	A	W	E	G	L	G	Y	.	Y	S	R	V	R	N	L	H	A	A	V	K	E	V	K	T	R	.	.	.	.	.	Y	G	G	K	V	P	D	D	P	D	E	F	S	R	L	K	G	V	G	P	Y	T	V	G	A	V	L	S	L	A	Y	G	V	P	E	.	P	A	V	.	N	G	N	V	M	R	V
Template Known Secondary structure							T	T	S	S		.	T																	.	.	.	.	.		T	T					S						T	S	T	T														T					.				.
Template Predicted Secondary structure												.																		.	.	.	.	.																																				.				.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.		.	.	.	.	.	.	150
		245	.	.	.	.												250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	P	G	M	T	.	.	.	.	.	.	.	.	.	.	.	P	A	Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I
Query Conservation							.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	R	L	F	L	V	T	D	D	I	A	K	C	S	T	R	K	R	F	E	Q	I	V	R	E	I	M	A	Y	E	N	P	G	A	F	N	E
Template Known Secondary structure						T	T			S		T	T	S	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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