Job Description P04395 Confidence 99.95% Date Thu Jan 5 10:58:16 GMT 2012 Rank 13 Aligned Residues 166 % Identity 19% Template d1orna_ SCOP info DNA-glycosylase DNA-glycosylase Endonuclease III Resolution 1.70

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		N	P	Q	I	V	N	G	A	L	G	R	L	G	A	A	R	P	G	L	R	L	P	G	C	V	.	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D
Query Conservation																											.
Alig confidence																											.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	Q	Q	I	R	Y	C	L	D	E	M	A	K	M	F	P	D	A	H	C	E	L	V	H	R	N	P	F	E	L	L	I	A	V	V	L	S	A	Q	C	T	D	A	L	V	N	K	V	T	K	R	L	F	E	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	P	H	D	Y	I	A	V	P
Template Known Secondary structure																		T	T					S			S	S												T	T	S																	.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.	.	.	.	.	.
		166	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		P	Q	A	.	.	.	.	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.																									.	.	.	.	.																																			.					.
Template Conservation																																	.	.	.	.	.																																			.					.
Template Sequence		L	E	E	L	E	Q	D	I	R	S	I	G	L	Y	R	N	K	A	R	N	I	Q	K	L	C	A	M	L	I	D	K	.	.	.	.	.	Y	N	G	E	V	P	R	D	R	D	E	L	M	K	L	P	G	V	G	R	K	T	A	N	V	V	V	S	V	A	F	G	V	P	.	A	I	A	V	.	D	T	H	V
Template Known Secondary structure									T	G	G	G	S	S																			.	.	.	.	.	S	T	T	S			S						T	T	S	T	T																		.					.
Template Predicted Secondary structure																																	.	.	.	.	.																																			.					.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.		.	140	.	.
		242	.	.	.	.	.	.								.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		K	Q	R	F	P	G	M	.	.	.	.	.	.	.	T	P	A	Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	V	S	K	R	L	G	F	C	R	W	D	D	S	V	L	E	V	E	K	T	L	M	K	I	I	P	K	E	E	W	S	I	T	H	H	R
Template Known Secondary structure									T	S	S		T	T														S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions