Job Description P04395 Confidence 99.87% Date Thu Jan 5 10:58:16 GMT 2012 Rank 21 Aligned Residues 143 % Identity 20% Template d1kg2a_ SCOP info DNA-glycosylase DNA-glycosylase Mismatch glycosylase Resolution 1.20

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		G	C	V	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	.	.	.	.	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H
Query Conservation																																																														.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.									.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Sequence		I	D	K	T	P	Y	K	V	W	L	S	E	V	M	L	Q	Q	T	Q	V	A	T	V	I	P	Y	F	E	R	F	M	A	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	V	T	D	L	A	N	A	P	L	D	E	V	L	H	L	W	T	G	L	G	Y	Y	A	.	R	A	R	N	L	H	K
Template Known Secondary structure		S	S														T	S	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							S										T	T	S			T		.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.														60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.												.	250	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	.	.	.	.	.	.	.	.	.	.	.	T	P	A	Q	I
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.																																			.					.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																																			.					.
Template Sequence		A	A	Q	Q	V	A	T	L	.	.	.	.	.	H	G	G	K	F	P	E	T	F	E	E	V	A	A	L	P	G	V	G	R	S	T	A	G	A	I	L	S	L	S	L	G	K	H	.	F	P	I	L	.	D	G	N	V	K	R	V	L	A	R	C	Y	A	V	S	G	W	P	G	K	K	E	V	E	N	K	L
Template Known Secondary structure										.	.	.	.	.	S	T	T	S				S						T	S	T	T																	S	.					.													T			S		T	T	S
Template Predicted Secondary structure										.	.	.	.	.																																			.					.
Template SS confidence
		92	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	S	L	S	E	Q	V	T	P	A	V	G	V	E	R	F	N	Q	A
Template Known Secondary structure											S	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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