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Job DescriptionP04395
Confidence99.93%DateThu Jan 5 10:58:16 GMT 2012
Rank19Aligned Residues161
% Identity19%Templated1keaa_
SCOP infoDNA-glycosylase DNA-glycosylase Mismatch glycosylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  VNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQA. .
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Template Sequence  VSTILTFWNTDRRDFPWRHTRDPYVILITEILLRRTTAGHVKKIYDKFFVKY. . . . . . . . . . . . . KCFEDILKTPKSEIA
Template Known Secondary structure  S



GGGG


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   13......20.........30.........40.........50.........60.... .....70.........
 
   169170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  . . LKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFP
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Template Sequence  KDIKEIGLSNQRAEQLKELARVVIND. . . . . YGGRVPRNRKAILDLPGVGKYTCAAVMCLAFGKK. AAMV. DANFVRVIN
Template Known Secondary structure  TGGGS
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S
TSTT

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   80.........90.........100..... ....110.........120.........130......... 140... ......150..
 
   247. .250.........260.........270.
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Query Sequence  GM. . . . . . . . . . TPAQIRRYAERWKPWRSYALLHI
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Template Sequence  RYFGGSYENLNYNHKALWELAETLVPGGKCRDFNL
Template Known Secondary structure 
GGGTT

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TT
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   153......160.........170.........180.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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