Job Description P04395 Confidence 88.79% Date Thu Jan 5 10:58:16 GMT 2012 Rank 41 Aligned Residues 128 % Identity 20% Template d1dgsa1 SCOP info SAM domain-like RuvA domain 2-like NAD+-dependent DNA ligase, domain 3 Resolution 2.90

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	.	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T
Query Conservation																																										.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																	.																							.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		K	L	I	E	R	L	L	E	K	G	L	V	R	.	.	.	.	.	.	.	.	.	.	.	D	V	A	D	L	Y	H	L	R	K	E	D	L	L	G	L	E	R	M	G	E	K	S	A	Q	N	L	L	R	Q	I	E	E	S	K	H	R	G	L	.	.	.	.	.	.	.	.	.	E	R	L	L	Y	A	L	G
Template Known Secondary structure										T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	G	G	G	G							T	T	S	S			S	T	T											G	G	G				.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		452	.	.	.	.	.	.	.	460	.	.	.	.												.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.										.	.	.	.	.	.	510	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	T	P	A	Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W	Y	T	E	G	W	Q	P	D	E
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		L	P	G	V	G	E	V	L	A	R	N	L	A	R	R	.	F	G	T	M	D	R	L	L	E	A	S	L	E	E	L	I	E	V	E	E	V	G	E	L	T	A	R	A	I	L	E	T	L	K	D	P	A	F	R	D	L	V	R	R	L	K	E	A	G	V	S	M	E	S
Template Known Secondary structure			S	S												T	.	T	S	B					T	T								T	S	T	T																												T	T				B
Template Predicted Secondary structure																	.
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions