Job Description P04395 Confidence 100.00% Date Thu Jan 5 10:58:16 GMT 2012 Rank 8 Aligned Residues 188 % Identity 23% Template c3s6iA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:dna-3-methyladenine glycosylase 1; PDBTitle: schizosaccaromyces pombe 3-methyladenine dna glycosylase (mag1) in2 complex with abasic-dna. Resolution 2.28 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	F	D	L	Q	C	N	P	Q	I	V	N	G	A	L	G	R	L	G	A	A	R	P	G	L	R	L	P	G	C	V	D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P
Query Conservation
Alig confidence									.	.	.	.																																																									.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																																																									.	.	.	.	.	.	.	.
Template Sequence		I	H	L	S	G	L	D	.	.	.	.	E	N	W	K	R	L	V	K	L	V	G	N	Y	R	P	N	R	S	M	E	K	K	E	P	Y	E	E	L	I	R	A	V	A	S	Q	Q	L	H	S	K	A	A	N	A	I	F	N	R	F	K	S	I	S	N	N	G	.	.	.	.	.	.	.	.	Q	F	P	T	P
Template Known Secondary structure						T	S		.	.	.	.												S						T	T	T	T	S													S	S	S														T	S	S	G	G	G	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure									.	.	.	.																																																									.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.									.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	.	.	.	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.
Template Conservation
Template Sequence		E	E	I	R	D	M	D	F	E	I	M	R	A	C	G	F	S	A	R	K	I	D	S	L	K	S	I	A	E	A	T	I	S	G	L	I	P	T	K	E	E	A	E	R	L	S	N	E	E	L	I	E	R	L	T	Q	I	K	G	I	G	R	W	T	V	E	M	L	L	I	F	S	L	N	R	D	D	V	M	P
Template Known Secondary structure							S									T																			T	S	S							T	T	S										T	T	S	T	T													T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.								.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		P	D	D	Y	L	I	K	Q	R	F	P	G	M	.	.	.	.	.	.	.	T	P	A	Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W	Y	T	E	G	W	Q
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	D	L	S	I	R	N	G	Y	R	Y	L	H	R	L	P	K	I	P	T	K	M	Y	V	L	K	H	S	E	I	C	A	P	F	R	T	A	A	A	W	Y	L	W	K	T	S	K	L	A
Template Known Secondary structure		T	T												T	T		S	S												G	G	G	T	T												G	G	G	S	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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