Job Description P04395 Confidence 99.94% Date Thu Jan 5 10:58:16 GMT 2012 Rank 17 Aligned Residues 143 % Identity 22% Template c3n0uB_ PDB info PDB header:hydrolase, lyase Chain: B: PDB Molecule:probable n-glycosylase/dna lyase; PDBTitle: crystal structure of tm1821, the 8-oxoguanine dna glycosylase of2 thermotoga maritima Resolution 1.50 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		D	A	F	E	Q	G	V	R	A	I	L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	.	.	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A
Query Conservation																																																																.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.						.	.	.	.									.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template Sequence		D	L	F	C	E	L	S	F	C	V	L	T	A	N	W	S	A	E	G	G	I	R	A	Q	K	E	I	G	K	G	F	V	H	L	.	.	.	.	.	.	.	.	.	.	.	P	L	E	E	L	.	.	.	.	A	E	K	L	R	E	V	G	H	R	Y	P	Q	K	R	A	E	F	I	V	E	N	R	K	L	L
Template Known Secondary structure														T	T	S													T	T					S	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.							T	T		S	S												G	G	G	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.						.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70												.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																		250	.
Predicted Secondary structure																							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T	L	Q	.	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D	V	F	L	P	D	D	Y	L	I	K	Q	R	F	P	G	M	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A
Query Conservation																							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																		.																					.						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																							.						.
Template Sequence		G	K	.	.	L	K	N	L	V	K	G	D	P	F	Q	S	R	E	F	L	V	R	N	A	K	G	I	G	W	K	E	A	S	H	F	L	R	N	T	G	V	E	.	D	L	A	I	L	.	D	K	H	V	L	R	L	M	K	R	H	G	L	I	Q	E	I	P	K	G	W	S	K	K	R	Y	L	Y	V	E	E
Template Known Secondary structure		T	T	.	.							S													S	T	T												T	T	T			.	S					.											T	T	S		S	S			S	S
Template Predicted Secondary structure				.	.																																							.						.
Template SS confidence
		102	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	R	R	Y	A	E	R	W	K	P	W	R	S	Y	A	L	L	H	I	W	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	R	K	V	A	E	A	F	G	E	S	P	G	K	F	D	L	Y	L	W	Y
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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