Return to main results Retrieve Phyre Job Id

Job DescriptionP04395
Confidence34.32%DateThu Jan 5 10:58:16 GMT 2012
Rank115Aligned Residues202
% Identity13%Templatec2nqlB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  YTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRL
Query Conservation    
  




    
 

  

    
 
    
 
          
                             



Alig confidence 








....


































































Template Conservation     

  
 ....                               


 
 
  
  
 

             
   
  
Template Sequence  LTQPRKVPY. . . . LGALREGEVVNPNGYIVRKGNRTVYPTFDRSVLVRMTTEAGTVGWGETYGIVAPGAVAALINDLLAG
Template Known Secondary structure 
SS



....SS


TT

B
TTS
TTT

SS
TT


SS
T
Template Predicted Secondary structure 





....





































Template SS confidence 















































































   13......20. ........30.........40.........50.........60.........70.........80........
 
   82.......90.........100.. .......110.........120.........130.........140.........150....
Predicted Secondary structure 






.....























..
Query SS confidence 




















. . . . .



















































. .
Query Sequence  FDLQCNPQIVNGALGRLGAAR. . . . . PGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYIC. .
Query Conservation   


 
    
  
  
    ..... 


     
 

 

 


 



   
     

    
           ..
Alig confidence 




















.....


























........
















..
Template Conservation   
 
            
                
 



 




 

  
 
........
  



            
Template Sequence  FVIGRDASDPSAVYDDLYDMMRVRGYTGGFYVDALAALDIALWDIAGQEAGKS. . . . . . . . IRDLLGGGVDSFPAYVSGL
Template Known Secondary structure  TT

SSSTTGGGT
SSTSB........TT


S


Template Predicted Secondary structure 
















........







Template SS confidence 















































































   8990.........100.........110.........120.........130.........140. ........150.........160
 
   155....160.........170.........180 .........190... ......200.........210......
Predicted Secondary structure  .









..........


...












Query SS confidence  .

























. . . . . . . . . .












. . .






















Query Sequence  . FPTPQRLAAADPQALKALGMPLKRAE. . . . . . . . . . ALIHLANAALEGT. . . LPMTIPGDVEQAMKTLQTFPGIG
Query Conservation  .



  

      
   
    

 .......... 
   
     
 ...
        

    
  
 


Alig confidence  .









.














..........












...






















Template Conservation             .       
    




     
   
  

   
    
 



       
      
    
Template Sequence  PERTLKARGEL. AKYWQDRGFNAFKFATPVADDGPAAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFD
Template Known Secondary structure 

SS.TT

TTS
TT

TTS

S
S
GGG
Template Predicted Secondary structure 



.























Template SS confidence 











































































   161........170. ........180.........190.........200.........210.........220.........230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions