Job Description P04395 Confidence 93.25% Date Thu Jan 5 10:58:16 GMT 2012 Rank 31 Aligned Residues 98 % Identity 20% Template c2csdB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:topoisomerase v; PDBTitle: crystal structure of topoisomerase v (61 kda fragment) Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		L	G	Q	L	V	S	V	A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	.	G
Query Conservation																																																																																.
Alig confidence																												.	.	.	.	.	.	.	.	.									.								.	.																										.
Template Conservation																												.	.	.	.	.	.	.	.	.									.								.	.
Template Sequence		V	C	P	D	L	T	L	E	E	A	K	S	V	N	R	T	L	A	T	L	I	D	E	H	G	L	.	.	.	.	.	.	.	.	.	S	P	D	A	A	D	E	L	.	I	E	H	F	E	S	I	.	.	A	G	I	L	A	T	D	L	E	E	I	E	R	M	Y	E	E	G	R	L	S	E	E	A	Y	R	A
Template Known Secondary structure				T	T																		T	T	T			.	.	.	.	.	.	.	.	.									.						S		.	.						S											T	T	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.									.								.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.										.	.	.	.	.	.	.	370		.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	E	Q	A	M	K	T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q	A	K	D
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		A	V	E	I	Q	L	A	E	L	T	K	K	E	G	V	G	R	K	T	A	E	R	.	L	L	R	A	F	G	N	P	E
Template Known Secondary structure													S	T	T			S	S					.						S	S
Template Predicted Secondary structure																								.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions