Job Description P04395 Confidence 94.43% Date Thu Jan 5 10:58:16 GMT 2012 Rank 25 Aligned Residues 80 % Identity 18% Template c2bcuA_ PDB info PDB header:transferase, lyase/dna Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	.	M	T	I	P	G	D	V	E	Q	A	M	K
Query Conservation																																																																					.
Alig confidence																					.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																					.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	G	Y	A	K	A	I	N	A	L	K	S	F	H	K	P	V	T	.	.	.	.	.	.	.	.	.	S	Y	Q	E	A	.	.	.	.	.	.	.	.	.	.	C	S	I	P	G	I	G	K	R	M	A	E	K	I	I	E	I	L	E	S	G	H	L	R	K	L	D	H	I	S	E	S	V	P	V	L	E
Template Known Secondary structure													T	T		S	S				.	.	.	.	.	.	.	.	.	S					.	.	.	.	.	.	.	.	.	.		T	S	T	T																S	S		G	G	G	G	G			T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.										.	.	.	.	.											300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		L	F	S	N	I	W	G	A	G	T	K	T	A	Q	.	.	M	W	Y	Q	Q	G
Template Known Secondary structure					T	S	T	T								.	.					T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions