Return to main results Retrieve Phyre Job Id

Job DescriptionP04395
Confidence22.09%DateThu Jan 5 10:58:16 GMT 2012
Rank132Aligned Residues38
% Identity8%Templatec1nnjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250.........
Predicted Secondary structure 
















Query SS confidence 















































Query Sequence  FPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAER
Query Conservation 
 






  


  

  
 

  
  
   
            
 
Alig confidence 
























..........












Template Conservation 








 



 
 


     .......... 
       
   
Template Sequence  VAGLGNIYVDEVLWLAKIHPEKETN. . . . . . . . . . QLIESSIHLLHDS
Template Known Secondary structure  SS


TT

TT
BGG..........G

Template Predicted Secondary structure 











..........

Template SS confidence 















































   166...170.........180.........190 .........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions