Job Description P04395 Confidence 92.14% Date Thu Jan 5 10:58:16 GMT 2012 Rank 36 Aligned Residues 83 % Identity 11% Template c1kdhA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna Resolution 3.00 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	A	K	L	T	A	R	V	A	Q	L	Y	G	E	R	L	D	D	F	P	E	Y	I	C	F	P	T	P	Q	R	L	A	A	A	D	P	Q	A	L	K	A	L	G	M	P	L	K	R	A	E	A	L	I	H	L	A	N	A	A	L	E	G	T	L	P	M	T	I	P	G	D	V	E	Q	A	M	K	T
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template Sequence		C	L	A	F	M	R	A	S	S	V	L	K	S	L	P	F	P	I	T	.	.	.	.	.	.	.	.	.	S	M	K	D	T	E	G	I	P	.	.	.	.	.	.	.	C	L	G	D	K	V	K	S	I	I	E	G	I	I	E	D	G	E	S	S	E	A	K	A	V	L	N	D	E	R	Y	K	S	F	K	L
Template Known Secondary structure														T		S	S				.	.	.	.	.	.	.	.	.	S	G	G	G	G	T	T		S	.	.	.	.	.	.	.	S																S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	T	F	P	G	I	G	R	W	T	A	N	Y	F	A	L	R	G	W	Q
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		F	T	S	V	F	G	V	G	L	K	T	A	E	.	.	K	W	F	R	M	G
Template Known Secondary structure				T	S	T	T								.	.					T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions