Job Description P18811 Confidence 100.00% Date Thu Jan 5 11:37:10 GMT 2012 Rank 15 Aligned Residues 268 % Identity 20% Template c3qk7C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 Resolution 2.70 Å

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		63	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.
Query SS confidence														.	.	.	.
Query Sequence		Q	S	G	V	I	G	L	I	V	R	D	L	.	.	.	.	S	A	P	F	Y	A	E	L	T	A	G	L	T	E	A	L	E	A	Q	G	R	M	V	F	L	L	H	G	G	K	D	G	E	Q	L	A	Q	R	F	S	L	L	L	N	Q	G	V	D	G	V	V	I	A	G	A	A	G	S	S	D	D	L	R	R
Query Conservation														.	.	.	.
Alig confidence														.	.	.	.																										.																																			.
Template Conservation																																											.																																			.
Template Sequence		R	T	D	A	I	A	L	A	Y	P	S	R	P	R	V	L	N	N	S	T	F	L	E	X	I	S	W	I	G	I	E	L	G	K	R	G	L	D	L	L	L	.	I	P	D	E	P	G	E	K	Y	Q	S	L	I	H	L	V	E	T	R	R	V	D	A	L	I	V	A	H	T	Q	P	E	D	F	.	R	L	Q
Template Known Secondary structure												S	S	S	G	G	G																		T	T	T						.					T	T												T	T			S						S			S	S			.
Template Predicted Secondary structure																																											.																																			.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	E	E	K	A	I	P	V	I	F	A	S	R	A	S	Y	L	D	D	V	D	T	V	R	P	D	N	M	Q	A	A	Q	L	L	T	E	H	L	I	R	N	G	H	Q	R	I	A	W	L	G	G	Q	S	S	S	L	T	R	A	E	R	V	G	G	Y	C	A	T	L	L	K	F	G	L	P	F	H	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	Q	K	Q	N	F	P	F	L	A	L	G	R	S	H	L	P	K	P	Y	A	W	F	D	F	D	N	H	A	G	A	S	L	A	V	K	R	L	L	E	L	G	H	Q	R	I	A	F	V	S	T	D	A	R	I	S	Y	V	D	Q	R	L	Q	G	Y	V	Q	T	X	S	E	A	G	L	X	P	L	A	G
Template Known Secondary structure						T	T							S					S	S																							T	T			S								S		S																	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	L	E	C	T	S	S	Q	K	Q	A	A	E	A	I	T	A	L	L	R	H	N	P	T	I	S	A	V	V	C	Y	N	E	T	I	A	M	G	A	W	F	G	L	L	K	A	G	R	Q	S	G	E	S	G	V	D	R	Y	F	E	Q	Q	V	S	L	A	A	F	T	D	A	T	P	T	T	L	D	D	I
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	Q	K	A	D	P	T	R	P	G	G	Y	L	A	A	S	R	L	L	A	L	E	V	P	P	T	A	I	I	T	D	C	N	X	L	G	D	G	V	A	S	A	L	D	K	A	G	L	L	.	.	.	.	.	.	.	.	.	G	G	E	G	I	S	L	I	A	Y	D	G	L	P	D	D	S	L	L	D	I
Template Known Secondary structure								S	S													T	S	S	S			S					S	S															T		B	.	.	.	.	.	.	.	.	.	S	T	T	S	B						T		S		T	T				S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.										.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		299	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		P	V	T	W	A	S	T	P	A	R	.	E	L	G	I	T	L	A	D	R	M	M	Q	K	I	T	H	E	E	T	H	S	R	N	L	I	I	P	A	R	L	I	A	A
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		A	V	T	P	I	V	Q	N	T	R	T	S	V	G	K	Q	I	A	S	X	I	C	D	L	L	G	G	K	D	P	K	E	L	Q	V	L	W	Q	P	E	I	G	E	G
Template Known Secondary structure											S	S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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