Job Description P18811 Confidence 99.97% Date Thu Jan 5 11:37:10 GMT 2012 Rank 34 Aligned Residues 261 % Identity 24% Template c3k9cA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family protein; PDBTitle: crystal structure of laci transcriptional regulator from rhodococcus2 species. Resolution 2.14 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	G	L	I	V	R	D	L	S	A	P	F	Y	A	E	L	T	A	G	L	T	E	A	L	E	A	Q	G	R	M	V	F	L	L	H	G	G	K	D	G	E	Q	L	A	Q	R	F	S	L	L	L	N	Q	G	V	D	G	V	V	I	A	G	A	A	G	S	S	D	D	L	R	R	M	A	E	E	K	A
Query Conservation
Alig confidence								.																																			.																											.	.
Template Conservation								.																																			.																											.	.
Template Sequence		R	L	L	G	V	V	.	F	E	L	Q	Q	P	F	H	G	D	L	V	E	Q	I	Y	A	A	A	T	R	R	G	Y	D	V	X	L	S	A	V	A	P	S	.	R	A	E	K	V	A	V	Q	A	L	X	R	E	R	C	E	A	A	I	L	L	G	T	R	F	D	.	.	T	D	E	L	G	A	L	A	D	R
Template Known Secondary structure								.			T	T																		T	T									B	T	T	.	B										T	T	T	T								T					.	.									T	T
Template Predicted Secondary structure								.																																			.																											.	.
Template SS confidence
		72	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	I	F	A	S	R	A	S	Y	L	D	D	V	D	T	V	R	P	D	N	M	Q	A	A	Q	L	L	T	E	H	L	I	R	N	G	H	Q	R	I	A	W	L	G	G	Q	S	S	S	L	T	R	A	E	R	V	G	G	Y	C	A	T	L	L	K	F	G	L	P	F	H	S	D	W	V	L	E	C	T
Query Conservation
Alig confidence																																																			.																							.
Template Conservation																																																			.																							.
Template Sequence		V	P	A	L	V	V	A	R	A	S	G	L	P	G	V	G	A	V	R	G	D	D	V	A	G	I	T	L	A	V	D	H	L	T	E	L	G	H	R	N	I	A	H	I	D	G	A	D	A	.	P	G	G	A	D	R	R	A	G	F	L	A	A	X	D	R	H	G	L	S	A	S	.	A	T	V	V	T	G	G
Template Known Secondary structure		S						S	S			S	S	T	T	S																					T	T			S							T	T	S	.	T	T															T	T		G	G	G	.
Template Predicted Secondary structure																																																			.																							.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	K	Q	A	A	E	A	I	T	A	L	L	R	H	N	P	T	I	S	A	V	V	C	Y	N	E	T	I	A	M	G	A	W	F	G	L	L	K	A	G	R	Q	S	G	E	S	G	V	D	R	Y	F	E	Q	Q	V	S	L	A	A	F	T	D	A	T	P	T	T	L	D	D	I	P	V	T	W	A	S
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.
Template Sequence		T	T	E	T	E	G	A	E	G	X	H	T	L	L	E	X	P	T	P	P	T	A	V	V	A	F	N	D	R	C	A	T	G	V	L	D	L	L	V	R	S	G	R	D	.	.	.	.	.	.	.	.	.	V	P	A	D	I	S	V	V	G	Y	D	D	S	R	L	A	R	I	P	H	V	Q	X	T	T	I	S
Template Known Secondary structure		S	S													T	S	S	S			S					S	S														T	T			.	.	.	.	.	.	.	.	.	T	T	T	T										T	T	T	T		T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.										270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	R	E	L	G	I	T	L	A	D	R	M	M	Q	K	I	T	H	E	E	T	H	S	R	N	L	I	I	P	A	R	L	I	A	A	K
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		Q	D	A	T	H	X	A	E	A	A	V	D	G	A	L	A	Q	I	S	G	D	K	A	V	.	.	D	L	V	L	A	P	H	L	V	R	R	A
Template Known Secondary structure																					T					.	.												S
Template Predicted Secondary structure																										.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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