Job Description P18811 Confidence 99.97% Date Thu Jan 5 11:37:10 GMT 2012 Rank 33 Aligned Residues 258 % Identity 19% Template c3jy6B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of laci transcriptional regulator from lactobacillus2 brevis Resolution 1.97 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	G	L	I	V	R	D	L	S	A	P	F	Y	A	E	L	T	A	G	L	T	E	A	L	E	A	Q	G	R	M	V	F	L	L	H	G	G	K	D	G	E	Q	L	A	Q	R	F	S	L	L	L	N	Q	G	V	D	G	V	V	I	A	G	A	A	G	S	S	D	D	L	R	R	M	A	E	E	K	A
Query Conservation
Alig confidence																																																																						.	.
Template Conservation																																																																						.	.
Template Sequence		K	L	I	A	V	I	V	A	N	I	D	D	Y	F	S	T	E	L	F	K	G	I	S	S	I	L	E	S	R	G	Y	I	G	V	L	F	D	A	N	A	D	I	E	R	E	K	T	L	L	R	A	I	G	S	R	G	F	D	G	L	I	L	Q	S	F	S	N	P	.	.	Q	T	V	Q	E	I	L	H	Q	Q
Template Known Secondary structure									S		T	T	S															G	G	G	T									T	T															T	T		S						S	S	S			.	.								T	T	S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	V	I	F	A	S	R	A	S	Y	L	D	D	V	D	T	V	R	P	D	N	M	Q	A	A	Q	L	L	T	E	H	L	I	R	N	G	H	Q	R	I	A	W	L	G	G	Q	S	S	S	L	T	R	A	E	R	V	G	G	Y	C	A	T	L	L	K	F	G	L	P	F	H	S	D	W	V	L	E	C	T
Query Conservation
Alig confidence																																																														.	.	.
Template Conservation																																																														.	.	.
Template Sequence		M	P	V	V	S	V	D	R	E	M	D	A	C	P	W	P	Q	V	V	T	D	N	F	E	A	A	K	A	A	T	T	A	F	R	Q	Q	G	Y	Q	H	V	V	V	L	T	S	E	L	E	L	S	R	T	R	Q	E	R	Y	R	G	.	.	.	I	L	A	A	A	Q	D	V	D	V	L	E	V	S	E	S	S
Template Known Secondary structure		S						S				S	S		S	S																				T	T	T											G	G	G											.	.	.			T	T		S									T	T	S
Template Predicted Secondary structure																																																														.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	K	Q	A	A	E	A	I	T	A	L	L	R	H	N	P	T	I	S	A	V	V	C	Y	N	E	T	I	A	M	G	A	W	F	G	L	L	K	A	G	R	Q	S	G	E	S	G	V	D	R	Y	F	E	Q	Q	V	S	L	A	A	F	T	D	A	T	P	T	T	L	D	D	I	P	V	T	W	A	S
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		Y	N	H	S	E	V	H	Q	R	L	T	Q	L	I	T	Q	N	D	Q	K	T	V	A	F	A	L	K	E	R	W	L	L	E	F	F	P	N	L	I	I	S	G	L	I	.	.	.	.	.	.	.	.	.	D	N	Q	T	V	T	A	T	G	F	A	D	T	D	F	I	R	R	.	.	M	K	L	T	L	I	T
Template Known Secondary structure																	S	S		S							S	S															T	S		.	.	.	.	.	.	.	.	.		S	S	S						B				T	T	T	T	T	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.										.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	R	E	L	G	I	T	L	A	D	R	M	M	Q	K	I	T	H	E	E	T	H	S	R	N	L	I	I	P	A	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	P	F	L	M	G	A	S	S	A	E	I	M	L	R	Q	L	A	G	E	K	V	A	P	E	K	M	V	I	P	A	K	L
Template Known Secondary structure																				T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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