Job Description P77581 Confidence 99.87% Date Thu Jan 5 12:30:46 GMT 2012 Rank 211 Aligned Residues 326 % Identity 13% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	T	.	.	.	.	.	.	.	.	.	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	A	D	R	.	.	.	.	V	F	F	C	N	S	G
Query Conservation																																											.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence											.	.					.	.	.																								.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation											.	.					.	.	.
Template Sequence		E	R	A	Y	N	F	N	A	G	.	.	P	A	A	L	.	.	.	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A
Template Known Secondary structure									S	S	.	.	S				.	.	.											T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S
Template Predicted Secondary structure											.	.					.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.			.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.
Predicted Secondary structure																																					.																																								.
Query SS confidence																																					.																																								.
Query Sequence		A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	.	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	.	I	D	D	S
Query Conservation																																					.																																								.
Alig confidence															.	.	.	.	.	.	.	.															.																					.	.	.	.	.	.	.													.
Template Conservation															.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Sequence		S	T	Q	F	A	M	I	P	M	N	F	L	K	.	.	.	.	.	.	.	.	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	.	.	.	.	.	.	.	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N
Template Known Secondary structure															.	.	.	.	.	.	.	.	T	T									S														S									G	G	.	.	.	.	.	.	.	G	T	T		S				G	G	G					T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	F	P	V	G	A	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.																							.	.	.	.	.													.
Template Conservation																				.	.	.	.	.	.	.	.	.																							.	.	.	.	.													.
Template Sequence		A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A	Q	F	K	.	.	.	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	.	.	.	.	.	F	D	L	N	Q	F	G	L	V	Y	A	G	.	A	Q	K	N	L	G	P	S	G	V	T	V	V
Template Known Secondary structure									S			T	T	T	T				S	.	.	.	.	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S		.	.	.	.	.			G	G	G		S						.	T	T	T	T	T			S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																							.	.	.	.	.													.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160										.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.													.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	G	G	F	Y	R
Template Known Secondary structure					G	G	G	S	S	S			T	T	S		G	G	G								T	T	T		S	S																				T	T																						T	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		332	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																																	.	.
Query SS confidence							.	.	.																																	.	.
Query Sequence		V	R	G	L	G	.	.	.	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C	E	H
Query Conservation							.	.	.																																	.	.
Alig confidence							.	.	.																																	.	.
Template Conservation
Template Sequence		G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L	A	S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F	K	R	S
Template Known Secondary structure			S	S		G	G	G	B		S	S							S															T	T			S		B			T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions