Job Description P77581 Confidence 99.92% Date Thu Jan 5 12:30:46 GMT 2012 Rank 178 Aligned Residues 344 % Identity 14% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.
Predicted Secondary structure																									.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	.	.	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	.	.	.	.	.	.	.	.	.	.	F	A	D	R	V	F	F	C
Query Conservation																									.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence								.																	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		D	Q	R	A	T	K	.	V	D	L	G	I	G	A	Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	S	Y	N	H	E	Y	L	G	I	T	G	L	P	S	L	T	S	N	A	A	K	I	I	F	G	T	Q	S	D	A	L	Q	E	D	R	V	I	S	V	Q	S
Template Known Secondary structure					S	S		.				S	S				B		T	T	S		B															T		T	T								T	T																T	T						T	T
Template Predicted Secondary structure								.
Template SS confidence
		27	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	G	A	E	A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D
Query Conservation
Alig confidence																			.	.	.	.	.	.																	.																								.	.
Template Conservation																			.	.	.	.	.	.																	.																								.	.
Template Sequence		L	S	G	T	G	A	L	H	I	S	A	K	F	F	S	K	F	.	.	.	.	.	.	F	P	D	K	L	V	Y	L	S	K	P	T	W	A	N	H	.	M	A	I	F	E	N	Q	G	L	K	T	A	T	Y	P	Y	W	A	N	E	T	K	S	.	.	L	D	L	N	G	F	L	N	A	I	Q	K	A	P	E
Template Known Secondary structure																			.	.	.	.	.	.		T	T								S			T	T		.						T	T	T											T	T	T	T		.	.													S		T
Template Predicted Secondary structure																			.	.	.	.	.	.																	.																								.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.							.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	.	.	.	.	.	.	.	.	.	.	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	.	L	D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T	V	S	P	V	F	V	C	Q	S	F	A	K
Template Known Secondary structure		T								S	S		T	T	T		.																		T	T								S		T	T	T	S	S	S						T										T	T	T	T										T	T
Template Predicted Secondary structure																	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		253	.	.	.	.	.	.	260	.	.	.	.	.													.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.									.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		A	L	G	G	G	F	P	V	G	A	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	.	.	.	.	.	.	.	.	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	A	G	M	Y	G	E	R	V	G	C	F	H	L	A	L	T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	K	D	M	V	T	M	S	S	R	I	T	K	M	R
Template Known Secondary structure		T	S			G	G	G											S		T	T																		T	T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L	F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R
Query Conservation
Alig confidence																																	.	.	.	.	.	.																					.	.	.	.						.
Template Conservation																																	.	.	.	.	.	.																					.	.	.	.						.
Template Sequence		H	A	L	R	D	H	L	V	K	L	G	T	P	G	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	.	.	.	.	.	.	T	P	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	A	S	G	.	.	.	.	R	A	S	I	A	.	G	L	N	Q	G	N	V	E	Y	V	A	K	A
Template Known Secondary structure												T		S	S			T							S	S							.	.	.	.	.	.																		T	T	S	.	.	.	.				G	G	.	G			T	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.																					.	.	.	.						.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.							.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.					.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.
		393	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	A	C	E	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	E	V	V	R	F	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions