Job Description P77581 Confidence 100.00% Date Thu Jan 5 12:30:46 GMT 2012 Rank 52 Aligned Residues 335 % Identity 16% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.																		.	.
Query SS confidence																																												.	.	.	.	.	.																		.	.
Query Sequence		Q	G	K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	F	W	H	T	G	N	G	Y	.	.	.	.	.	.	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	.	.	A	D	R	V	F	F	C	N	S	G	A	E	A
Query Conservation																																												.	.	.	.	.	.																		.	.
Alig confidence												.	.	.	.	.	.																											.	.	.	.	.	.																		.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		E	G	V	I	Y	L	D	G	N	S	.	.	.	.	.	.	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N
Template Known Secondary structure		T	T						T	T	T	.	.	.	.	.	.	S				B	T	T											T						G	G	G					T	S	G	G	G											T	T	T	T			T	T	S					S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	S	T	C	A	V	I
Query Conservation
Alig confidence																			.																														.	.	.	.	.	.	.	.	.
Template Conservation																			.																														.	.	.	.	.	.	.	.	.
Template Sequence		L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	.	E	R	R	V	I	V	T	E	T	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	.	.	.	.	.	.	.	.	.	Y	T	L	R	L	V	D	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V	V	M
Template Known Secondary structure																	S	T	.	T								T	T	S																	S	S	.	.	.	.	.	.	.	.	.							S	S	G	G	G						S	T	T
Template Predicted Secondary structure																			.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	Y	G	V	T	P	D	L	L	T	T	A	K	A	L	G	G	G	.	F	P	V	G	A	L	L	A	T	E
Query Conservation																																																																							.
Alig confidence															.	.	.	.																							.	.	.																												.
Template Conservation															.	.	.	.																							.	.	.
Template Sequence		L	T	H	V	N	Y	K	T	G	Y	M	H	D	.	.	.	.	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	.	.	.	A	G	A	V	P	V	D	L	H	Q	A	G	A	D	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W	V	S	P
Template Known Secondary structure				S	B		T	T	T		B	B			.	.	.	.												T								T	T	T	.	.	.	T	T	T	S								T		S						S	S	S	T	T				T	T									T
Template Predicted Secondary structure															.	.	.	.																							.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280																								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		E	C	A	R	V	M	T	V	G	T	H	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	.	.	.	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I	E	L	V	E	Q
Template Known Secondary structure		T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.					.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																																											.
Query SS confidence																.	.	.	.																																											.
Query Sequence		I	N	H	R	Y	G	L	F	S	E	V	R	G	L	.	.	.	.	G	L	L	I	G	C	V	L	N	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	K	A	G	V	M	V	L	I	A	G	G	N	V	V	R	F	A	P	.	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A
Query Conservation																.	.	.	.																																											.
Alig confidence																.	.	.	.											.	.	.	.	.																												.
Template Conservation																														.	.	.	.	.
Template Sequence		R	C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	.	.	.	.	.	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	R	E	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F	T	E	V	W	D	A	V	Q	I	L	G	E	I
Template Known Secondary structure				T	T	S						S		S	S	G	G	G	B		S							T	T	.	.	.	.	.										T	T	T							T	T	T								T	T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		397	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		399	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions