Job Description P77581 Confidence 99.96% Date Thu Jan 5 12:30:46 GMT 2012 Rank 87 Aligned Residues 345 % Identity 12% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		K	E	Y	I	D	F	A	G	G	I	A	V	N	A	L	G	H	A	H	P	E	L	R	E	A	L	N	E	Q	A	S	K	.	.	.	.	.	F	W	H	T	G	N	G	Y	T	N	E	P	V	L	R	L	A	K	K	L	I	D	A	T	F	A	.	.	.	.	.	.	D	R	V	F	F	C	N	S	G	A	E
Query Conservation																																		.	.	.	.	.																											.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	V	I	Q	M	G	L	A	E	N	Q	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M	A	G	G	A	T	G
Template Known Secondary structure		T	S	B				S	S					S	S												T	T	S	S	T	T												T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	N	E	A	A	L	K	L	A	R	K	F	A	H	D	R	Y	G	S	H	K	S	G	I	V	A	F	K	N	A	F	H	G	R	T	L	F	T	V	S	A	G	G	Q	P	A	Y	S	Q	D	F	A	P	L	P	A	D	I	R	H	A	A	Y	N	D	I	N	S	A	S	A	L	I	D	D	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																																					.	.	.	.	.																		.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Sequence		A	N	E	T	I	I	F	C	L	.	.	.	.	.	.	.	.	A	D	P	G	D	A	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	V	Q	L	I	P	I	H	C	E	S	.	.	.	.	.	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S	N
Template Known Secondary structure											.	.	.	.	.	.	.	.			T	T							S	S			T	T					T	T	T	T	T											T	.	.	.	.	.	T	T	T	T																	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
			183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240													.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	T	C	A	V	I	V	E	P	I	Q	G	E	G	G	V	V	P	A	S	N	A	F	L	Q	G	L	R	E	L	C	N	R	H	N	A	L	L	I	F	D	E	V	Q	T	G	V	G	R	T	G	E	L	Y	A	Y	M	H	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	V	T	P	D	L	L	T
Query Conservation		.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		I	K	V	K	G	L	I	L	T	N	P	S	N	P	L	G	.	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S
Template Known Secondary structure											S	S		T	T	T		.																	T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	A	K	A	L	G	.	G	G	F	P	V	G	A	L	L	A	T	E	E	C	A	R	V	M	T	V	G	T	H	G	T	T	Y	G	G	N	P	L	A	S	A	V	A	G	K	V	L	E	L	I	N	T	P	E	M	L	N	G	V	K	Q	R	H	D	W	F	V	E	R	L	N	T	I	N	H	R	Y	G	L
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		L	S	K	D	M	G	L	P	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	V	G	I
Template Known Secondary structure		S	T	T	T	S	S		G	G	G								S													T	T	S														T	T																														T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																.										.	.	.	.	.	.
Query SS confidence																		.	.	.	.																.										.	.	.	.	.	.
Query Sequence		F	S	E	V	R	G	L	G	L	L	I	G	C	V	L	N	.	.	.	.	A	D	Y	A	G	Q	A	K	Q	I	S	Q	E	A	A	.	K	A	G	V	M	V	L	I	A	.	.	.	.	.	.	G	G	N	V	V	R	F	A	P	A	L	N	V	S	E	E	E	V	T	T	G	L	D	R	F	A	A	A	C
Query Conservation																		.	.	.	.																.										.	.	.	.	.	.
Alig confidence																		.	.	.	.																.										.	.	.	.	.	.											.
Template Conservation																																																															.
Template Sequence		K	C	L	K	N	N	A	G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	E	C	Q	E	P	G	W	F	R	V	C	F	A	.	N	M	D	D	G	T	V	D	I	A	L	A	R	I	R	R	F	V
Template Known Secondary structure			B				S	S	S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	T		S	S	S	S							S	.	S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		398
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		435

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions