Return to main results Retrieve Phyre Job Id

Job DescriptionP77581
Confidence64.04%DateThu Jan 5 12:30:46 GMT 2012
Rank281Aligned Residues88
% Identity14%Templated1gvia3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution3.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   149150.........160.........170.........180.. .......190........ .200.........210.
Predicted Secondary structure 























....










.............



Query SS confidence 

































. . . .















. . . . . . . . . . . . .












Query Sequence  GGQPAYSQDFAPLPADIRHAAYNDINSASALIDD. . . . STCAVIVEPIQGEGGV. . . . . . . . . . . . . VPASNAFLQGLRE
Query Conservation                         
 
 
      ....    
  
      
 .............       
  
  
Alig confidence 

































....















.............












Template Conservation                        
   

   




 


  
 
 

       

   
   

   

  

  

 
Template Sequence  AISPKGARPWGSEDPTPTSFFGGDLQGIIDHLDYLADLGITGIYLTPIFRAPSNHKYDTADYFEIDPHFGDKETLKTLVK
Template Known Secondary structure 


SS

S


SS


SS





TT





BS
SSSSTTS
S
TTSB
TTT

Template Predicted Secondary structure 





















































Template SS confidence 















































































   151........160.........170.........180.........190.........200.........210.........220.........230
 
   212.......220.........230......
Predicted Secondary structure 















Query SS confidence 
























Query Sequence  LCNRHNALLIFDEVQTGVGRTGELY
Query Conservation 
    
  

 


    
  
   
Alig confidence 
























Template Conservation    
  

 



 
 

        
Template Sequence  RCHEKGIRVMLDAVFNHCGYEFAPF
Template Known Secondary structure  T


SB

TT
Template Predicted Secondary structure 










Template SS confidence 
























   231........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions